| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0189 |
|---|
| Symbol | |
|---|
| ID | 5758450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 187717 |
|---|
| End bp | 190071 |
|---|
| Gene Length | 2355 bp |
|---|
| Protein Length | 784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641301388 |
|---|
| Product | PGAP1 family protein |
|---|
| Protein accession | YP_001567258 |
|---|
| Protein GI | 160901677 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA AATACAAAAT TCTCTTATCG ATTGTTGTAA TAGGTATTTT AATTCTTGTT
TTTTCTATTA TTTTTAAAAA CATATTTTTG CCTCCAAATC AGATAACTCC TTCTTCTAAC
AATATTCAAA TAATGGTTCC TGATTTTGCT TTTCCTTCAA AGAAACACAT TGATATAAGC
GTTGTGGATA AAAGTTCTGC GGAATATCAA GAATTGATCA ACTACAAAAA TTTTTACGGT
GAAATATATA AAATTACTTT CTCAGATGAA AGTAATGAAT CCTCTATTTT ACCAATTACC
TTAAGATACA AGATTCCAAA GGATAATTAC TTTGGAGATA ACTTCGTCAA TTTCTCCTTG
GCTTACATCA CACAGGAAGA ACCTCCTGTT ATCTCTGAAT TCAGTGGAGA AACAATAGTA
AAAATAGATG ACGAGTATTA CATAGAAGCG CAAACATTCC AAATAACTAA AGTAAATTAT
ATAGGTCTAG TCATTGAATC TCCAGAAGAA TCATCCAGTG GGCTCAAGGT TATAAAAGAA
GCGCCACCAA CCCTTGAACC TGATATTATT TTAATTCCTG GAACTGATAT TAATTTCTTA
GGAAAGATAA TGAATGTACC TGAAAATGGT TATCCACAAT CTTTTTGGTC ATCCCTTTTT
CCAAATAGAA CCATTTGGAG TTACAATTAC CCACTGACAT CTACTAGAAG TAAAAATTAC
AACGATTCTT TTATCAGTTT TGTTGAAAGA ACAGGGATTG ATAGTTACAT TGAATTTGAA
GGAAGGCGTC TCGCTCAAGA ACTTTCTAGA TTTCCTAATA AAAAGTTTGA CATTATTGCA
CATGGCATTG GCGGATTAAT TGCTAGATAT GCTTTGGAGT CTACTCAAAC AATTCAAAAT
GTTGAAAATT TAGTACTCAT TTCTACTCCA AATAAAGGTA GTAACCTAGC AAACCCCCTT
TTTTTCAATT TACTCTTTGG GAAAAACACA GATATTTTAT CTCAATTGTT TAATGTTGAG
TATAGCACGA TATTAAAAAT CACTTTGCAA ATTGGTTCTT ACCTAGATCA AATAAATTCT
TACTATGAAG ATCTTATTCC TGACTCTGAA TTTCTGAACA AATTAAACTC TTTTGGCATA
AGAAATGACA TCAGATATTT AACGATTATT GGTACTAGTC CCGCAATTGA TGAAGATTTA
TCAAATAAAT ATATTGCCAG GCTGTATCCA GAATTTGTTC GAGGAAAGGG AGATGGAATA
GTAAGTGTTG ACAGCGCTAA CTTAGAAGGG ATTGATAAAA CTTACTATTC TCAAAAGAGC
TTTTATGAAA TTTACAATGA TTCAGATGTT TTGAATATAA TAGTTAATTT TTTAGAAGAA
TCCGTCCCTT CATATTCAGT GGAGCCCTTT ACAGATGATA ATTTCGTCGA ATACACATAC
GAAACAGTAG AAGGTACCCC AACTCCAGAT CAAAGTGAAA ATCCCCGCCC AACTATTATT
TCTACTTTTA AACTCCCTTC AGCGTATAAA GAAAGTACAA TTTTGCTCAA TTCTGAGAAG
CAAGGAGAAA TAGACGAAGA TACAATGAGC ATTATCGAAG TAGGAGAAAA TATTTACTTT
AAAAGTCCTA ATGCTATTTA CAACAGCAAA CTAGAAAAAA TATTTTCAAA TAAAATTATG
GGTGGATTAG TATTCAACAA CCAGTATTAT ATATCTACTG TTGATGGAGT ATACATTTTG
AATGAAAACG GCAAAATTGA TAAAATTAAT TCACAAATAC CTTCTAAAGG TACCGAAATT
TATTATTTAC CAAATGTAGG GTTTTTAAGT GTGGAATATG AACCAAACAA TTGTAATGTC
TATCTCAACG ATTCTCTGAT AAATGAAGGC AGCAATTTTA TATCATTAAA AGTAATAAAT
GGGGAAGTAT ATGTCATCTT TGAGGATAAA ATATCAAAAC TACAAAACAT GGATATTGTG
GAAATGATAA ATACTTCTAC AATTCAAGAA GTTTTGGGAA CTCAGTTTGG AGAGATTACT
GATTTTGCTT TGTATAACAA TGACTACTTT ATTTTATTTT CAAACTATAA ATTAGTTCTG
TGGGATAGTT CAAAAAATGG GTTACAACTC ATAGAAGACG GAAACATAGG AAGATTAAAA
TTACAAATAT TTAATGATAA ATTATTTGTA TTTGGGAAAG ATCATGTGAG TTACTTACTT
TTAAAAGAAG CTACTTTCCC CGGTTTTTTT CAAAGATCAG ATACTAATAT AATTGATGTC
CTCATCGATA AAAGGGGCAA AGGATGGATG GTTACCAAAA ATAACCAAAT TGAAATAATT
AATTTTTCCT TGTGA
|
|---|
| Protein sequence | MEKKYKILLS IVVIGILILV FSIIFKNIFL PPNQITPSSN NIQIMVPDFA FPSKKHIDIS
VVDKSSAEYQ ELINYKNFYG EIYKITFSDE SNESSILPIT LRYKIPKDNY FGDNFVNFSL
AYITQEEPPV ISEFSGETIV KIDDEYYIEA QTFQITKVNY IGLVIESPEE SSSGLKVIKE
APPTLEPDII LIPGTDINFL GKIMNVPENG YPQSFWSSLF PNRTIWSYNY PLTSTRSKNY
NDSFISFVER TGIDSYIEFE GRRLAQELSR FPNKKFDIIA HGIGGLIARY ALESTQTIQN
VENLVLISTP NKGSNLANPL FFNLLFGKNT DILSQLFNVE YSTILKITLQ IGSYLDQINS
YYEDLIPDSE FLNKLNSFGI RNDIRYLTII GTSPAIDEDL SNKYIARLYP EFVRGKGDGI
VSVDSANLEG IDKTYYSQKS FYEIYNDSDV LNIIVNFLEE SVPSYSVEPF TDDNFVEYTY
ETVEGTPTPD QSENPRPTII STFKLPSAYK ESTILLNSEK QGEIDEDTMS IIEVGENIYF
KSPNAIYNSK LEKIFSNKIM GGLVFNNQYY ISTVDGVYIL NENGKIDKIN SQIPSKGTEI
YYLPNVGFLS VEYEPNNCNV YLNDSLINEG SNFISLKVIN GEVYVIFEDK ISKLQNMDIV
EMINTSTIQE VLGTQFGEIT DFALYNNDYF ILFSNYKLVL WDSSKNGLQL IEDGNIGRLK
LQIFNDKLFV FGKDHVSYLL LKEATFPGFF QRSDTNIIDV LIDKRGKGWM VTKNNQIEII
NFSL
|
|---|
| |