Gene Pmob_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0108 
Symbol 
ID5758185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp104959 
End bp107067 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content40% 
IMG OID641301309 
Producthypothetical protein 
Protein accessionYP_001567180 
Protein GI160901599 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE
[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00280188 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGAT CAATGTACTC TGGAATCACA GGTTTAAGGA ACTTTCAGGA TCAACTCGAC 
ATAGTTGCAA ACAATATCGC TAACGTTAAT ACCGTAGGTT ACAAAGGTTC AAGGGCAACA
TTTCAAACAA CTCTTTTTCA AACATTAAGT GCAGGAAATG CACCACAAAA CCAACTAGGT
GGAACAAATC CTATGCAAAT TGGATTAGGA TCTCAATTAG CTTCTATAGA CAAATTAATG
ACACAAGGTT CTCCTATGTC TACAGGTAAA GCTACAGATC TTATGATTCA AGGAGAAGGG
TTTTTTATTC TCTCAGATGG AATAGGTCAA TACTATACAC GGGCTGGCAA TTTCACTAGA
GATTACAACG GATTCTTTGT AGATCCTGCA TCTGGTATGA AATTGCAAGG TTGGACAGCA
AAAATTGATC AAGAAGGAAA TAGGACCATT GACACCAACG ATCCTATAGG AGATATCCAA
ATATCAAGCG GACAAGTAAT GGCGGCAAAA CAAACCTCCT TTGTAAGACT TGCACATAAT
TTAAACGCAG GTGCGGGTAT TCAAGACACA ACAATTGTGG TCAAGAGTAC AACAGGTGAA
AATATACCCG TAAAATTCTC TTTCAAAAGG GATATGAGCG AAGAAAACAA GGATAAAAAT
GTTTATAATT GGACGGCAAG TGTAGTTGGT TCTGAGTACA AATTTGCAGT TGACGATGGT
TCAGGTAATT TAACTTCAAC TAACCAAATT AGTGGAAAAG TAGAGCTTGA CGATACGGGA
AATGTAATTA GTTGGGTTAA TTACGATGAA GACGGTGATC CTTTAGCAGA AAGTAAGATT
TCTATATACG ACATAAACGG TGAAATAGTG GATCAATATG GTGATTCTGT TCCTGTAGAT
ATCAATGCAG GGGCAGGTAC TGCTACCCTC ACAGGAAGCA TTAGGGTTAC AGACTCAGCG
GGAGAAGCAG TTTATTATGA TCCGGAAGAT ATTGATATTA GTTTTGATGC TTCCGGAAAT
CCAACAATAA CTTTGAATAT CGATGGTACA CCAGTAAATT TTACTGGACC TGCAAGTACA
GTTGGTGAAT TCAACGATTT ACTAACAACG GGAATTACAT CTGGAGATTA TACCCTCACG
GGTTTGCGTT TAACCGGTGC CTCTGATGCT GATACTATTG ATGGGCAGGG GTTTACCGGC
TTAAAATCCG TTAGAGAGAT GATTCAACCA CCTTCAGGTG GAGCTATAAG ATTCACCGAT
CTCAACAATC CTACCAACTT TTCAGAAGCT AACTATATCA GCCCATCTGT AACAACATCA
ACAGTAGTAT ACGATTCTCT AGGTAACCCT TACAATACTT ATTTAAAATT CACAAAAATA
GATGCTAACA CTTGGTATTG GAAGGCAGAG TTAGAAGACG GAACTCCATT GTATAAAAGT
ACCGCTGATG GTCAATTACT CGATGATTCC GCCGAAGGAG TAATAGCTTT TGACTCAAAT
GGTAACATAG CTGCAACTCA ATGGAAAATT AACCCTGACG GCACCATAGA TCAAACTATC
GGGGACGGTG ACGATGGAGC AGCGGGTTTC TGGTTCGACC CAGCTGAGTT GGGCGCTGCT
TTAAATCCAA GCGTGGACCC TCAATCAGCA GCTGGTGCAG GTCCTGTTAA CGTTTCGATT
AATTTTCAAG AACTTTCTCA GTTTTTTGCA GAAAATTCTA TAGCGGTTAC TGAACAAGAT
GGAAACGCTC AAGGAACTTT GGAGTCTTTC GCTATAAACA CCAATGGACA GATTATAGGA
TCTTTCACAA ACGGTTTAAC AGCTCCATTG GGGCAAGTAG CTCTAGCCAC TTTTAACAAC
CCCGAAGGTT TATCAGCTAC AGGTAACTCT ATGTACGCTA TGAGTTCAAA CAGTGGACTT
CCACAAATAG GTGTCTCTGG GGTTGGAGGA AGGGGAAGTA TTAATCCAGG GGCTTTAGAA
ATGTCAAATG TGGATTTAGC AGAAGAATTC ACCAACATGA TCATAGCTCA AAGAGGATTC
CAAGCAAATT CAAGAAGTAT AACCACTGCA GATGCAATCC TTAACGAACT TGTAAACATC
AAGAGATGA
 
Protein sequence
MLRSMYSGIT GLRNFQDQLD IVANNIANVN TVGYKGSRAT FQTTLFQTLS AGNAPQNQLG 
GTNPMQIGLG SQLASIDKLM TQGSPMSTGK ATDLMIQGEG FFILSDGIGQ YYTRAGNFTR
DYNGFFVDPA SGMKLQGWTA KIDQEGNRTI DTNDPIGDIQ ISSGQVMAAK QTSFVRLAHN
LNAGAGIQDT TIVVKSTTGE NIPVKFSFKR DMSEENKDKN VYNWTASVVG SEYKFAVDDG
SGNLTSTNQI SGKVELDDTG NVISWVNYDE DGDPLAESKI SIYDINGEIV DQYGDSVPVD
INAGAGTATL TGSIRVTDSA GEAVYYDPED IDISFDASGN PTITLNIDGT PVNFTGPAST
VGEFNDLLTT GITSGDYTLT GLRLTGASDA DTIDGQGFTG LKSVREMIQP PSGGAIRFTD
LNNPTNFSEA NYISPSVTTS TVVYDSLGNP YNTYLKFTKI DANTWYWKAE LEDGTPLYKS
TADGQLLDDS AEGVIAFDSN GNIAATQWKI NPDGTIDQTI GDGDDGAAGF WFDPAELGAA
LNPSVDPQSA AGAGPVNVSI NFQELSQFFA ENSIAVTEQD GNAQGTLESF AINTNGQIIG
SFTNGLTAPL GQVALATFNN PEGLSATGNS MYAMSSNSGL PQIGVSGVGG RGSINPGALE
MSNVDLAEEF TNMIIAQRGF QANSRSITTA DAILNELVNI KR