| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0053 |
|---|
| Symbol | |
|---|
| ID | 5757550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 47667 |
|---|
| End bp | 48500 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641301254 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_001567125 |
|---|
| Protein GI | 160901544 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0228565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CCTTTGTTTT TGATTTGGAT GGAACTCTTT TAAATTCTGA GGTAAGAATT
TCGCCAAAAA CATACCAAGC TTTAAAAAGA TTAAAAGAAG AAGGACATAT TATAATAATA
GCAAGTGGAA GAATGTACGC TTCAACTATG TACGTAGTGG AAAACTTTCT ACCTTTTTTG
AAAGGGAATG TGATTATTTC CTCATACAAC GGGGGATATA TAGTCGATCA CAATGGAAAA
GTAGTTTTTG AAAAAGGTGT AGCAAATGAA AGTGCAATTA AATGTATAAA ATTTCTTAGA
GACCTTAATA TCCACAGACA TATCTATATA AACGATAAAC TTATTTCGGA AATAGACGAT
AAAGAGATTA GAGATTACTC TAAACATTCA TTTGTTGATT ACGTACTGGT AGATGATTTA
ATAGCTGAAA TAGAAACCTC ATCTCACCCA ACATTAAAAA TATTGGCAAT TGGAGAGCCA
GATAAAATAG ACGTAATTAA AAAATTAGCG GAAAATGAGC TCCAAGGAGA GTTTAACCTT
ATGAAATCTT GGGATACCTA TTTGGACTTT ATTCCTTACG GTGTCTCCAA AGGAAATAGC
TTGAAGATAA TTTCAAAAAT CTACAACTTA GATCCAAATA CTCTTTACGT TTTTGGTGAT
TCCGAAAACG ATATAGACAT GCTTGAATTA ACAAAAAACA GTTTCGCGAT GGGAAACGCT
AAAGAAGATG TAAAAAAAGT AGCAAATTAC TTGTTACCAA GTAACGATGA GGATGGTGTG
GCATATGCCA TTGAAAAGAT ACTGGCTGAT GATCTCGATA ATGTTAATAT TTAG
|
|---|
| Protein sequence | MKKTFVFDLD GTLLNSEVRI SPKTYQALKR LKEEGHIIII ASGRMYASTM YVVENFLPFL
KGNVIISSYN GGYIVDHNGK VVFEKGVANE SAIKCIKFLR DLNIHRHIYI NDKLISEIDD
KEIRDYSKHS FVDYVLVDDL IAEIETSSHP TLKILAIGEP DKIDVIKKLA ENELQGEFNL
MKSWDTYLDF IPYGVSKGNS LKIISKIYNL DPNTLYVFGD SENDIDMLEL TKNSFAMGNA
KEDVKKVANY LLPSNDEDGV AYAIEKILAD DLDNVNI
|
|---|
| |