Gene Pmob_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0008 
Symbol 
ID5758062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand- 
Start bp5655 
End bp6632 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content37% 
IMG OID641301209 
ProductABC transporter periplasmic-binding protein 
Protein accessionYP_001567080 
Protein GI160901499 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000406397 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAGGT TTTTCGCGTT GGTGGGTATT ATAGTTATTT TGTTCTCTGC TGTTTTTTCT 
GAGGAATTGA CTGTCTATGT TTATGAAAGT TTCAGTTGGA TTGAGCAAGG AATGCTTCAA 
AAGTTCGAAG AGATGAACGA ATGTGAAGTA AAAGTGGTAA AATTAGGTGA CGCTGGTAAC 
GTTCTTACGA GATTGGTGTT GGAAAAGAAA AATCCTCGAG CAGATGTTGT CATTGGGCTT 
GATCAATCAC TAGCAGCAAA GGCGGTTGAA GAAGATTTAT TGATCCCTTA CAAGCCAAAA 
AACATTGAAA ATATTACAGA TAAAGCATTG ATATTTGATC CAGAATATTA TGTAATTCCT 
TATGACTATG GAGCTATAGC CATCATTTAT GATCCGGAAA GGATAGAAGA AAAATTAGAA 
TCCTTTGAAG ATCTAACGAA ATATAAAAAT TCGTTGATAA TACAGGATCC AAGAGCCTCA 
AGCACCGGTC AAGCTTTTTT ACTATGGACA ATAGCAGTGT ATGGAGATGA GTGGAAAGAG 
TTTTGGGAAA GACTTAAGCC TGCAATATTA ACGGTGAGTC CTAGCTGGGA TGATTCCTTT 
GCAAAATTTG AAATTGGTGA GGCACCAATG ATGGTCAGCT ATGCAACTGA TAGCGCATAT 
TCACAATATT ACTATGGATC TAGTAAGTAC AAGGTTTTTA TCCCCAAAGA AGGTGCTTAT 
GTTCAAATAG AAGGTGCGGG CATCGTTAAA GGTACTGATA ACTTAGATTT AGCCCAGAAA 
TTCATAGAAT TTTTGCTAAC AGAAGATTTT CAAAAAGAAA TACCTTTAAA TCAATGGATG 
TTCCCTGTAA TTGATGTTGA ACTGCCTGAG GTTTACCAAT ATGCAGTGGT TCCCGAAAAA 
ATTCTAACAA TTCCAGCTCA AGAAATTTCA AACAATCTGG AACAATGGCT GAAAGAATGG 
GAGGCTCTAT TATACTGA
 
Protein sequence
MKRFFALVGI IVILFSAVFS EELTVYVYES FSWIEQGMLQ KFEEMNECEV KVVKLGDAGN 
VLTRLVLEKK NPRADVVIGL DQSLAAKAVE EDLLIPYKPK NIENITDKAL IFDPEYYVIP 
YDYGAIAIIY DPERIEEKLE SFEDLTKYKN SLIIQDPRAS STGQAFLLWT IAVYGDEWKE 
FWERLKPAIL TVSPSWDDSF AKFEIGEAPM MVSYATDSAY SQYYYGSSKY KVFIPKEGAY 
VQIEGAGIVK GTDNLDLAQK FIEFLLTEDF QKEIPLNQWM FPVIDVELPE VYQYAVVPEK 
ILTIPAQEIS NNLEQWLKEW EALLY