| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_6056 |
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| Symbol | |
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| ID | 5751684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6764417 |
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| End bp | 6766129 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641301198 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001567069 |
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| Protein GI | 160901487 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.18473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATA TTCGCCGCAC CATCCTGTGG GTGATATTTG GCTTTTCGCT GGTCTTGCTA
TGGGACAAAT GGCAAGTGCA CAGCGGCAAG AAGGCCACTT TCTTCCCCGC GCCTGCCGTC
GCCACGGCCC CGGCACCTGA AACGGGCAAG GCGCCCGGCG ATGCCAGCGT GCCCTCGGCG
GCTGCTGCGG CAACGGCCGG TGCCGGCGAA GTGCCTGGCG GGGCTGCCGC CGCGCCCGAG
GCAGCCCCGC GCCAGAACGT CACCATCAGC ACCGACGTGC TGCGCCTGAC CTTCGACAGC
CAGGGCGGCA CGCTGCGCCA TGCCGAACTG CTCAAGTACG CGGATTCCGT GCACAAGGAC
AAGCCCGTGG TGCTGTTCGA CGAGAGCGTG CACCGCGTGT ACCTGGGCCA GTCGGGCCTG
ATCGGCGGCG GTTTCCCCAC GCACAAGACG ACCATGACCG CGCTGCCCGG CGCGCGCGAG
CTCAAGGACG GCGAGGACCA GATGGAACTG CGCTTCGAGT CGCCCGACAT GGGTGGCGTG
AAGCTGGTCA AGATCTGGAC GCTCAAGCGC GGCGCCTACG ACATCGGCGT GCGCCATGAA
GTGGTGAACA CCGGCACGGC GGCCGTGAGC CCGCAGCTGT ACCTGCAACT GGTGCGCGAC
GGCAACAAGC CCGAAGGCGA ACAGTCCACC ATGTACTCCA CCTTCACGGG CCCGGCCGTC
TACACCGACG AGAAGAAGTA CCAGAAGGTC GAGTTCAAGG ACATCGAGAG CGGCAAGGCC
AGCGTCGAGA AGTCGTCCTC GGGCGGCTAC GTGGCCATGG TCCAGCATTA CTTCGCCAGC
GCCTGGCTGC TGGCCGAAGG CATCCAGCGC GACAACTTCC TGCGCAAGGT GGACAACAAC
CTCTACGCCG TCGGCATGAT CACGCCGGTG GGCACCATCG AGCCCGGCCA GAGCAAGAGC
GTGGAAGCGC GCCTGTTCGC CGGTCCCCAG ATCGAAAAGC GCCTGGAATC GCTGGCGCCC
GGGCTGGAGC TGGTCAAGGA CTATGGCTGG CTGACCATCC TGGCCAAGCC GCTGTACTGG
CTGCTGGACA AGCTGCACGG CTTCCTGGGC AACTGGGGCT GGTCCATCGT GGCCCTGGTG
CTGCTGCTGA AGATCGCCTT CTACTGGCTC AATGCCAAGG CCTACTCCTC GATGGCCAAG
ATGAAGGCCA TCAACCCGCG CATCATGGAA ATGCGTGAGC GCCTCAAGGA CAAGCCCCAG
CAGATGCAGC AGGAGATGAT GCGCATCTAC CGCGAGGAAA AGGTCAACCC CATGGGCGGC
TGCCTGCCCA TCATCATCCA GATCCCGGTA TTCATCGCGC TGTACTGGGT GCTGCTGTCC
AGCGTGGAAA TCCGCAACGC GCCCTGGATC GGCTGGATCA CCGACCTGTC GGCCAAGGAT
CCTCTGTTCA TCCTGCCCGT GCTGATGACC CTGTCCTCGC TGCTGCAGAC CGCGCTGAAC
CCCGCTCCGC CGGATCCGAT GCAGGCCAAG ATGATGTGGA TCATGCCCCT GGTCTTCAGC
GTGATGTTCT TCTTCTTCCC GGCCGGCCTG GTGCTGTACT GGCTGACGAA CAACATCCTG
TCCATCGCCC AGCAGTGGAT CATCAACACC CGCATGGGCG TGCCGCCGCA GTTCAACCTG
CCCAAATTCG GCAAGTCCAC GCCGGCCAAG TAA
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| Protein sequence | MNDIRRTILW VIFGFSLVLL WDKWQVHSGK KATFFPAPAV ATAPAPETGK APGDASVPSA
AAAATAGAGE VPGGAAAAPE AAPRQNVTIS TDVLRLTFDS QGGTLRHAEL LKYADSVHKD
KPVVLFDESV HRVYLGQSGL IGGGFPTHKT TMTALPGARE LKDGEDQMEL RFESPDMGGV
KLVKIWTLKR GAYDIGVRHE VVNTGTAAVS PQLYLQLVRD GNKPEGEQST MYSTFTGPAV
YTDEKKYQKV EFKDIESGKA SVEKSSSGGY VAMVQHYFAS AWLLAEGIQR DNFLRKVDNN
LYAVGMITPV GTIEPGQSKS VEARLFAGPQ IEKRLESLAP GLELVKDYGW LTILAKPLYW
LLDKLHGFLG NWGWSIVALV LLLKIAFYWL NAKAYSSMAK MKAINPRIME MRERLKDKPQ
QMQQEMMRIY REEKVNPMGG CLPIIIQIPV FIALYWVLLS SVEIRNAPWI GWITDLSAKD
PLFILPVLMT LSSLLQTALN PAPPDPMQAK MMWIMPLVFS VMFFFFPAGL VLYWLTNNIL
SIAQQWIINT RMGVPPQFNL PKFGKSTPAK
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