Gene Daci_6054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6054 
Symbol 
ID5751682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6762198 
End bp6762677 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID641301196 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001567067 
Protein GI160901485 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.507117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTT CCTCCCACAA TGATTTGCGG CCACTGGCCC AGGCCATGTC GTCGGCCGTG 
GCTGTCGATG GTGTGCAGAA CGCACTGACC TTGGAGCAAT GGGATCTGCT GGCGCCCTAC
CTGGTGCCGG TCACGCTGGC GGCGGGCGAG CTGCTGTTTG CCGAAGGTTC GCTGGACCGC
AATCTGTACT TCGTGGAGTC CGGCAGCCTC AGCGTGCACT ACCAGGATGC GAAGGAGCGC
ATCCGCCTGG CCATCGTCGG CCCGGGCTCC ATCCTGGGCG AGGGCGCCTT CTTCGCCCAC
CGTGCGCGCC ATGCCACCGT GCAGGCGGCT GCGCCGGGAC GGCTGTGGTG CCTGACGGCC
ATGCGCTTCG CCGAACTCAG CAATCGCCAG CCCGGTGTGG CGCTGGCCCT GGTCATGGCG
GCCGGCCAGG TGCTTGCCCG CCGTGCTGTG GACAGCCGCC GCCGGGTGGC CAGTACCTGA
 
Protein sequence
MSSSSHNDLR PLAQAMSSAV AVDGVQNALT LEQWDLLAPY LVPVTLAAGE LLFAEGSLDR 
NLYFVESGSL SVHYQDAKER IRLAIVGPGS ILGEGAFFAH RARHATVQAA APGRLWCLTA
MRFAELSNRQ PGVALALVMA AGQVLARRAV DSRRRVAST