Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_6047 |
Symbol | |
ID | 5751678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6756943 |
End bp | 6757473 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641301189 |
Product | RNP-1 like RNA-binding protein |
Protein accession | YP_001567060 |
Protein GI | 160901478 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.240011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAATA AGCTTTACGT CGGCAACCTT CCCTATGGTG TGCGTGACAA CGACTTGGAG CAGGCATTCA GCCAGTTCGG CGCTGTCACC AGCGCCCGGG TCATGATGGA ACGCGACACA GGCCGCTCCA AGGGATTCGG GTTTGTCGAA ATGGGCAGCG ATGCCGAGGC ACAGGCAGCC GTTCAAGGCA TGAATGGCCA GCCATTGGGC GGGCGCAGCC TCGTGGTGAA CGAAGCGCGC CCCATGGAGC CTCGTCCCCC GCGCTCGGGC GGCTTTGGTG GCGGCGGCGG TGGTGGCGGC TATGGCCGTG GTGATGGCGG CGGTGGCTAC GGTGGCGGTG GCCGCGGTGA TGGCGGCGGC TACGGACGCA GCGATGGCGG CGGCGGTGGT GGCTATGGCC GTGGTGACGG CGGTGGTGGC GGCGGCTACG GCGGCCGTGG CGATGGTGGT TTCCGCAGCC CCTATGGCTC CGGCCCCCGC AATGGCGGCC GTGGCGGCGG CTGGGGAAAC AACAATAACA ACGGAGAATG A
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Protein sequence | MGNKLYVGNL PYGVRDNDLE QAFSQFGAVT SARVMMERDT GRSKGFGFVE MGSDAEAQAA VQGMNGQPLG GRSLVVNEAR PMEPRPPRSG GFGGGGGGGG YGRGDGGGGY GGGGRGDGGG YGRSDGGGGG GYGRGDGGGG GGYGGRGDGG FRSPYGSGPR NGGRGGGWGN NNNNGE
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