Gene Daci_6047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6047 
Symbol 
ID5751678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6756943 
End bp6757473 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID641301189 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_001567060 
Protein GI160901478 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.240011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATA AGCTTTACGT CGGCAACCTT CCCTATGGTG TGCGTGACAA CGACTTGGAG 
CAGGCATTCA GCCAGTTCGG CGCTGTCACC AGCGCCCGGG TCATGATGGA ACGCGACACA
GGCCGCTCCA AGGGATTCGG GTTTGTCGAA ATGGGCAGCG ATGCCGAGGC ACAGGCAGCC
GTTCAAGGCA TGAATGGCCA GCCATTGGGC GGGCGCAGCC TCGTGGTGAA CGAAGCGCGC
CCCATGGAGC CTCGTCCCCC GCGCTCGGGC GGCTTTGGTG GCGGCGGCGG TGGTGGCGGC
TATGGCCGTG GTGATGGCGG CGGTGGCTAC GGTGGCGGTG GCCGCGGTGA TGGCGGCGGC
TACGGACGCA GCGATGGCGG CGGCGGTGGT GGCTATGGCC GTGGTGACGG CGGTGGTGGC
GGCGGCTACG GCGGCCGTGG CGATGGTGGT TTCCGCAGCC CCTATGGCTC CGGCCCCCGC
AATGGCGGCC GTGGCGGCGG CTGGGGAAAC AACAATAACA ACGGAGAATG A
 
Protein sequence
MGNKLYVGNL PYGVRDNDLE QAFSQFGAVT SARVMMERDT GRSKGFGFVE MGSDAEAQAA 
VQGMNGQPLG GRSLVVNEAR PMEPRPPRSG GFGGGGGGGG YGRGDGGGGY GGGGRGDGGG
YGRSDGGGGG GYGRGDGGGG GGYGGRGDGG FRSPYGSGPR NGGRGGGWGN NNNNGE