Gene Daci_6042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6042 
Symbol 
ID5751673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6752169 
End bp6753389 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID641301184 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001567055 
Protein GI160901473 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGT CATGGGTGGC GCGCACAATC GACGGATTGC GAACCCGAAA GGCAGACATG 
AACCGCTTCC CACGCCGCCG CGCGCTGGCC CTGGCCGGCG CGGCCGCCGG CCTGCTGCTG
GCAGGCTGCG CCACGCCGCA GGCCGCCAAT TCCCCATCGC AGGCCGCGGA CTGGCCTCCC
CGGCCCGCGC TGATCGCGCA CCGCGGCGCA TCGGCACTGC GGCCAGAGCA CACGCTGGAG
GCCTACCGGG AGGCCATACG CGCGGGCGCC GACTTCATCG AGCCCGACCT GGTCATCACG
CGTGATGGCG TGCTGGTGGC GCGGCATGAG AACGCCATCG CCATCCTCGC GGCCGACGGC
AGCCTCAAGG AGGCCACCAC CAATGTGGCC GACCGCCCCG AGTTCGCGGC GCGCAAGACC
ACCAAAACCA TCGAGGGGCA GGCGATCACG GGCTGGTTCG TGGAGGATTT CACGCTGGCC
GAGCTGAAGA CGCTGCGTGC GCGTGAACGC ATCCCGGCGA TCCGCCCGGC GAATGTGCAG
TTCAATGACC GTTTCGAGGT GCCCACGCTG CAGGAGGTCA TCGACCTGGC CAAGGCGGAG
AGCGCGCGCA CGAACCGCAC CATAGGCATC TATCCCGAGA CCAAGCACCC GAGCTACTTC
CAGTCCATCG GCCTGCCGCT GGAGCCCGTG CTGCTGAAGC TGCTTGCGGA CAACGGCTGG
AACCATGCAC AGGCGCCAGT CTTCGTGCAG TCCTTCGAGG TCGAGAACCT GCGCTGGATG
CGTGCGCGCA GCAGCCTGCG CCTGGTGCAG TTGCTGGCGC CCAAGGGCAA GCCCTATGAC
AGCGTGGCAC GCGGCACGGG CCCCGGCTAT GCCGACATGG TCACGCCCGC AGGCCTGGCC
GAGATCGCGC GCTATGCCAA TGGCATAGGG CCGAGCAAGA GCATGGTGAT CCCCGTGGTG
CAGGGCGCCA ATGCGGCGCC CACGGCGCTG GTGGCCGATG CCCACCGTGC CGGGCTCCTG
GTCCATCCCT GGACGCTGCG ACCCGAGAAC GCCTTCCTGC CCCTGAGCCT GAAATCGCCG
CCCGCACAGG ACGGCGCCCG GCGCGGCAAT GCACGCGCCG ACATGGACGA TTTTCTGCGC
ACGGGCATCG ACGGCATCTT CACCGACGAT CCGTCGGTGG GGCGCGCGGC CATCGATGAC
CTGCTCAAAC CGAAGCCTTG A
 
Protein sequence
MPVSWVARTI DGLRTRKADM NRFPRRRALA LAGAAAGLLL AGCATPQAAN SPSQAADWPP 
RPALIAHRGA SALRPEHTLE AYREAIRAGA DFIEPDLVIT RDGVLVARHE NAIAILAADG
SLKEATTNVA DRPEFAARKT TKTIEGQAIT GWFVEDFTLA ELKTLRARER IPAIRPANVQ
FNDRFEVPTL QEVIDLAKAE SARTNRTIGI YPETKHPSYF QSIGLPLEPV LLKLLADNGW
NHAQAPVFVQ SFEVENLRWM RARSSLRLVQ LLAPKGKPYD SVARGTGPGY ADMVTPAGLA
EIARYANGIG PSKSMVIPVV QGANAAPTAL VADAHRAGLL VHPWTLRPEN AFLPLSLKSP
PAQDGARRGN ARADMDDFLR TGIDGIFTDD PSVGRAAIDD LLKPKP