Gene Daci_6040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6040 
Symbol 
ID5751671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6751096 
End bp6751482 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content69% 
IMG OID641301182 
ProductMerR family transcriptional regulator 
Protein accessionYP_001567053 
Protein GI160901471 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATCG GAGAACTCGC CCGACGCGCC GGCTGCTCGC CCAAGGCCGT CCGGCTGTAT 
GAATCACGGG GCCTGCTCGG CGCCGTGGCA CGGGCAGGCA GCTACCGCAT CTATGGCGAG
CAGGACCTGG TGCTTGTGCA GCGCATCCGC CAGGCGCTGG GACTGGGCTT TCGGCTGGAC
GAGCTGCACG GCCTGCACCG CATCCATGAG GCCGCAAGCT GGGAAGCCCT GGCCCGGCTG
CTGCGCGAGC GCAGCACCCA GGTTCAGGCG GACATCCGGC GCCTCCAGGC ACAGCAGTCC
CAGTTGGCGG CGCTGGAGCG CGAACTGCTC GAATGCAGCC TGGAGACGGC AGGTACCCAG
GGCGCCTGCG AACCCGCATT GGCCTGA
 
Protein sequence
MYIGELARRA GCSPKAVRLY ESRGLLGAVA RAGSYRIYGE QDLVLVQRIR QALGLGFRLD 
ELHGLHRIHE AASWEALARL LRERSTQVQA DIRRLQAQQS QLAALERELL ECSLETAGTQ
GACEPALA