Gene Daci_6038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6038 
Symbol 
ID5751669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6748581 
End bp6749465 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content73% 
IMG OID641301180 
Productalpha/beta hydrolase fold 
Protein accessionYP_001567051 
Protein GI160901469 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGC CGGCCCCCGC ACCCGTTCCC GCACCTGCCT CGCAAGGCCA GGTCACGCGC 
CTTGCGTCCA GCGACGGCGC CGAGCTGTCG CTGCGCGACT GGCCCGTGGA CGGGGGCCAG
GCGCGCGCCA CCGTGCTGCT GGTGCACGGC CTGGGCGAGC ACATCGGCCG CTATGAGGCG
CTGGCCCGGC GCCTCAATGC CTGGGGCTAT GCGGTGCGCG GCTACGACCA ATACGGCCAT
GGGCGCTCGG CAGGGCCGCG CGGCGGCTTG ACGGCCGATG GCCGGCTGCT GGATGACCTT
GCCGCCGTGG TCGATGCCAC GCGTGCCCAG CAGCCCGCTG GCCAGCCGCT GGTGCTGCTG
GGCCACAGCC TGGGCGGCCT GGTGGCTGCG CTGTTCGTGG CGCGTGCCAT CCGGCCTGTC
GATGCGCTGG TGCTGTCTTC GCCGGCCTTC GACGTGGGTC TGTCGCCCAT CCAGAAGCTG
CTCGTGGGCA CGCTGCCGCG CCTGGTGCCC GACCTGCGCG TGTCCAACGG CCTGCAGATT
CCCTATCTCT CGCATGACGT GGCGGTCTGC GATGCCTACC GCGCCGATCC GCTGTGCCAT
GACCGCATCA GCGCACGGCT GGCGCGCTTT CTGGCGCAGG GCGGCCCGCA GGTGCTGGCC
CGCGCGGGGC AGTGGGGCGT GCCCAGCCTG CTGATGTGGG CGGGGGACGA CAGGCTGGTG
GCGCCGGCCG GCAGCCAGGC CTTTGCCGAC CGCGCGCCAC CGGCCGTGGT ACAGGCGCAG
TGCTTTGACG GCGCCTACCA CGAGCTGTTC AACGAGCGCG ATGACTTCGC CGCGCCCGTG
TTCGCGCGGC TGCGCGACTG GCTGGGCCGC TTCAGGCCAG CGTAA
 
Protein sequence
MAAPAPAPVP APASQGQVTR LASSDGAELS LRDWPVDGGQ ARATVLLVHG LGEHIGRYEA 
LARRLNAWGY AVRGYDQYGH GRSAGPRGGL TADGRLLDDL AAVVDATRAQ QPAGQPLVLL
GHSLGGLVAA LFVARAIRPV DALVLSSPAF DVGLSPIQKL LVGTLPRLVP DLRVSNGLQI
PYLSHDVAVC DAYRADPLCH DRISARLARF LAQGGPQVLA RAGQWGVPSL LMWAGDDRLV
APAGSQAFAD RAPPAVVQAQ CFDGAYHELF NERDDFAAPV FARLRDWLGR FRPA