Gene Daci_6037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6037 
Symbol 
ID5751668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6747842 
End bp6748594 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content73% 
IMG OID641301179 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001567050 
Protein GI160901468 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCT TTCACTGCCC CATTGCGCTG CGCAGCGGCG CCGACATCGA CCTGCCGCCC 
GGCGCGGCGC GCCATGTGCA GGTGCTGCGC CTGCAGCCCG GCGACGGCAT CACCCTCTTC
GAAGGCCGCG CCGGCGAAGG CTTCAGCGGC GGCGAGTTCG AGGCCACCGT GCTGCGCATG
GGCCGCAGCG ACGTGGCCGT GCGCATAGGC GCGCACCACG CCGTGGAACG CGAGCCCCTG
CGCCCCGTGC ACCTGCTGGC AGGCATCACG GCCAACGAAC GCATGGACTG GCTGGTGGAG
AAGGCGGCCG AGCTGGGCGC CGCCAGCATC ACCCCGCTGG TGGCCGAGCG CAGCGTGCTC
AAGCTCAAGG GCGAGCGCGC CGAGAAAAAA CTCGCCCACT GGCAGGCCGT GGCCGTATCG
GCCTGCGAGC AGTGCACGCG CAACCGCGTT CCCCCGCTGC ACACCCCGGC AGACCTGGAG
GACTGGCTCG AGAGCGGGGC GCAACAGCTG CCGCCCGGCA CGCTGCGCCT GCTGCTGTCG
CTGGGCGAGG GCACGCGGCC GCTGGGTGAG GTCCTGGATG CCACGGCCGA GGATGCACCC
GTGGTCTTTC TCTCCGGCCC CGAGGGCGGC CTGTCGCCTG CCGAGGAGGC CCTGGCCCGT
GCCCAGGGCT TTGTGCCCGT CACGCTGGGG CCACGCGTGC TGCGCGCGGA AACCGCGCCC
CTGGCTGCGC TGGCGGCGCT TACGCTGGCC TGA
 
Protein sequence
MPRFHCPIAL RSGADIDLPP GAARHVQVLR LQPGDGITLF EGRAGEGFSG GEFEATVLRM 
GRSDVAVRIG AHHAVEREPL RPVHLLAGIT ANERMDWLVE KAAELGAASI TPLVAERSVL
KLKGERAEKK LAHWQAVAVS ACEQCTRNRV PPLHTPADLE DWLESGAQQL PPGTLRLLLS
LGEGTRPLGE VLDATAEDAP VVFLSGPEGG LSPAEEALAR AQGFVPVTLG PRVLRAETAP
LAALAALTLA