Gene Daci_6035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6035 
Symbol 
ID5751666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6744203 
End bp6746527 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content67% 
IMG OID641301177 
Productorganic solvent tolerance protein 
Protein accessionYP_001567048 
Protein GI160901466 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGG CCCAGCCCGC TGCAGCCGAC GAAGGCCGGC TGCAGCAAGT CCGCCCGCTG 
CGCCCCAGCA CGCTGATGCA GGAAACCTAT CCCGAGGCGG TGCGCTCCCA GCAGCCCGTC
TATGTGCGCG GTGACGCGCT CAGCGGCCAG CCGGACATCA ACTCGGTGGT CGAGGGCAAT
GCCGAACTGC GCCGCGGCGA CACCATGATC CGCGCCGACC GGCTCGAGTA CCAGGTGCCC
GACGACCGCG TCAATGCCTC GGGCGCAGTG CACATCAACC AGGCCGGCAA TGTCTACGAG
GGCACGCAGC TGGACCTGGA GGTCGATGCC TTCAAGGGCT TTTTCGACAA CGCCGGATAT
CGCTTCCTGG CCAATGGCGC CTACGGCAAA TCCTCGCGCG TGGACTTCAT CGACCGCGAC
CATGCCGTGG TCCACGACGC CACCTACACC ACCTGCCAGC GCGACGACGA GGCCAGCTGG
GAGCCGGCCT GGATGCTGCG CGCCCGGACC CTGCACATCG ATATGGCCGA GGAAGTGGGC
GTGGCCGAGG GCGCGGCCCT GCAGTTCAAG GGCGTGACCG TGCTGCCCGT GCCGCGCATG
AGCTTTCCGC TGTCGGACAA GCGCAAGTCG GGCCTGCTGC CTCCCACCAT GGGCCTGGAC
AAGCTCAGCG GCATCGAATA CACGCAGCCC TACTACTGGA ACCTTGCGCC CAACCGCGAC
ATGACCCTGT ATCCCTCGGT CATGAGCAAG CGCGGCGTCA ACCTGGGCGC CCAGTTCCGC
TACCTGGAGC CGACCTATTC GGGCGAGGCC TATGCGGCCT ACATGCCCGG CGACCGCCAG
CGCGACCGGG ACCGCTGGGC CTACTCGCTG CAGCACCGGG GTGTCATCGA CTCGCCCATC
GGTGGCCTGG GGTTGAACAT GAACCTCAAC CGCGTCAGCG ACGACAACTA CTGGCGCGAC
TTCCCGCTGG CCGCGAAATC GCTGCGCGAG CGCCTGCTGC CCAACGATGT GAACCTGTCC
TGGGCGCGCG GCGACAATGT GCTGACCCTG CGCACCCTGT ACTGGCAGAC CATGCAGGAT
GTGACGGCGC CCATTGCCCC GCCCTACGGC ATGAAGCCGC AGCTGCAATG GCGCTACACG
CCGCTGGACC TGCCGCACGG CCTGGACTTC AGCTTTGTGG CCGACACCAC GCGCTTCGAG
ATCGACAAGC CGCTGGCCGG CATGACCTAC AACAACGGCC AGCGCAGCTA CATGCTGGCC
CAGGTGAGCC GCCCCTTCCT GTCGCCGGGC GCCTTCATCA CGCCCAAGAT CCAGCTGCAC
ACCAGCAACT ACCAGGTGGA CAGCCTGATG AGCAACGGCA GCCGCAATGC CTCGCGCACG
CTGCCCACGG TCAGCGTGGA CAGCGGGCTG GTGTTCGAGC GCGACACTAC GCTGTTCGGC
CGCCAGCTGC TGCAGACCTT CGAGCCGCGC GCCTTCTACA CCTACACGCC CTACCGCGAC
CAGAGCTTTC TGCCGCTGTA TGACACGGCG CGCAACGACT TCAACTTCGC GAGCATCTAC
TCCGAGAACG ACTACAACGG CCAGGACCGC ATTGCCGACA ACCACCTGCT GACCCTGGGC
GCGACCACGC GCCTGATCGA CGGGACCACG GGTGCGGAAA AGGCGCGCTT CGGCATTGCG
CAGCGCGTGC GTTTCTCCGA TCAGAAGGTC ATCCTGCCCG GCGAGGTGCC GGCCACCAGC
CGCCTGTCCG ACGTGCTGCT GGGCGCGGCC ATCAACTGGA CCGATGCCTG GTCCACCGAA
GGCACGACCC AGTACAACCG CGACCTCAAC CGCTCGGTGC GTACCACCTT TGGTGCGCGC
TACAGCCCCA GCTCCTACCG CACGGTGAAC GTGGCCTACC GTACCCAGTA CGACACCGTG
GCGCGTACCG ACGCCAGCAA GCTGGTCGAT GTGGGCTGGC AATGGCCCAT CAACGACCTG
TGGGGCGACA AGGGGCGCGA CCTGGGCGCC GGCCGTGGCC AGGGCGGCGG GCGCTGGTAC
ACGGTGGGCC GACTGAACTA CAGCCTGAAG GACCGCAAGC TCGTCGATAC CGTGGTCGGG
CTGGAGTACG ACGGCTGCTG CTGGATTGGC CGCGTGGTGC TGGAGCGCCT GCAAAGCTCC
ATCACCCAGT CCAACACCCG GCTGCTGTTC CAGATCGAGT TCGTCGGCTT CTCGCGGCTG
AGCCTGGGTG CAGACCCGCA GCGCAGCCTC AAGCAGAATG TGCCGCGCTA CCAGTACCTG
CGCGAGTCCG TGACGCCTCC CAGCCGCTTC ACCAACTACG ATTAG
 
Protein sequence
MAQAQPAAAD EGRLQQVRPL RPSTLMQETY PEAVRSQQPV YVRGDALSGQ PDINSVVEGN 
AELRRGDTMI RADRLEYQVP DDRVNASGAV HINQAGNVYE GTQLDLEVDA FKGFFDNAGY
RFLANGAYGK SSRVDFIDRD HAVVHDATYT TCQRDDEASW EPAWMLRART LHIDMAEEVG
VAEGAALQFK GVTVLPVPRM SFPLSDKRKS GLLPPTMGLD KLSGIEYTQP YYWNLAPNRD
MTLYPSVMSK RGVNLGAQFR YLEPTYSGEA YAAYMPGDRQ RDRDRWAYSL QHRGVIDSPI
GGLGLNMNLN RVSDDNYWRD FPLAAKSLRE RLLPNDVNLS WARGDNVLTL RTLYWQTMQD
VTAPIAPPYG MKPQLQWRYT PLDLPHGLDF SFVADTTRFE IDKPLAGMTY NNGQRSYMLA
QVSRPFLSPG AFITPKIQLH TSNYQVDSLM SNGSRNASRT LPTVSVDSGL VFERDTTLFG
RQLLQTFEPR AFYTYTPYRD QSFLPLYDTA RNDFNFASIY SENDYNGQDR IADNHLLTLG
ATTRLIDGTT GAEKARFGIA QRVRFSDQKV ILPGEVPATS RLSDVLLGAA INWTDAWSTE
GTTQYNRDLN RSVRTTFGAR YSPSSYRTVN VAYRTQYDTV ARTDASKLVD VGWQWPINDL
WGDKGRDLGA GRGQGGGRWY TVGRLNYSLK DRKLVDTVVG LEYDGCCWIG RVVLERLQSS
ITQSNTRLLF QIEFVGFSRL SLGADPQRSL KQNVPRYQYL RESVTPPSRF TNYD