Gene Daci_6034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6034 
Symbol 
ID5751665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6742734 
End bp6744161 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content70% 
IMG OID641301176 
ProductSurA domain-containing protein 
Protein accessionYP_001567047 
Protein GI160901465 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTC TTTCCCAGAC CCATTGCTGC GCAGCTGCCG CTGTGGCGCT GGCCTTGCTG 
GCCACCACAG CCCAGGCGCA AGGCCTGCGT GTTCCGGGCC AGTCCAGGGC GCCCCAGGCC
GGCGATGCCT CCGTCTCGCG TGCGCTGGAC GCCACCAACC TGCCCTCGTC GCGCGATCGC
GGCGCCAAGG CAGGCGTGCG CTCGGCCGAT TACATCGTCG CCGTGGTCAA CTCCGAGCCG
GTGACCAACA ACGAAGTGCG TGCCCGCATG GCGCGCGTGG CGCAGAACAT CGCCGAGCAG
GGCGGCCAGA TGCCGCCCGA GGCGCTGCTG GCCCGCGAGG TGCTCGAGCG CCTGATCGTC
GAAAAGGCCC AGCTGCAGGA AGCCAAGGAC ACGGGCCTGC GCGTGGATGA CTACGCCGTG
GACCAGGCGC TGACCAATGT GGCGCGGCAA AACGGCCTGG ACAAGGCTGG CCTGCAGTCC
CGCCTGCGGG CCGAAGGCGT GAACGAAAAG CAGTTCCGTG AAGAGCTGCG CCGCCAGATC
ACGCTGCAAC GTCTGCGCGA GCGCGATGTG GACGGCCGCG TGCGCGTCAC CGATGCCGAC
ATCGATCGCT ACCTGGCTGA GCAGCGCAGC GGCGGTGCCG ACAAGGCACC GGCCGCCGTG
AACCTGGGCC ACATCCTGAT TTCCGTGCCC GAGAACGCCA GCCCCGCCGA AGTGGCCGAG
CGCGAGGCCC GCGCCAAGCA GGCCGCCGAG GCCGCCCGCA CGCAAGGCGA CTTCCTGGCC
GTGGTCAAGG AGTTCTCCGA TGTGCCCGAC GGCCAGGGCG GCGGCGCCAT GGGCATGCGC
CCGCTGGACC GCTATCCCGA GCTGTTCACC AAGGCCGTGG GCCAGACGGC GCAGGGCGGC
ATCGTCGGCC CCTTCCGTTC GGGCGCGGGC TTTCACGTGC TCAAGGTGCT GGAGAAGTCG
CAGGCCGGCA TGCCGTCCGT GGTCACGCAA AACCATGCGC GTCACATCCT GCTGCGCATT
GGCGACCAGA TGACCGAGGC CGATGCCGCC AAGCGCCTGG CCGACTACAA GCGCCGCGTG
GACAGCGGCC AGGCCAGCTT CGAATCGCTG GCCCGCGAGT TCTCGCAGGA CGGCAGCGCG
CGCAACGGCG GCGACCTGGG CTGGGCCTCG CCCGGCCAGT TCGTGCCCGA GTTCGAGCAG
GTGCTCAATG CGCTGCAGCC CGGCCAGGTC AGCGACCCGC TGGTCTCGCG CTTCGGTGTG
CACCTGATCC AGCTCATCGA GCGCCGCCAG GCTGCGCTGA CGCCGCGCGA GCAGCGCGAC
ATGGTTCGCA ACGTGGTGCG CGAGCGCAAG CTCGAAACCG ACTACCAGGC CTGGCTTCAG
GAGCTGCGTG GCCGCGCCTA CGTCGAGTAC CGCGAGCCTC CGCAATAA
 
Protein sequence
MRFLSQTHCC AAAAVALALL ATTAQAQGLR VPGQSRAPQA GDASVSRALD ATNLPSSRDR 
GAKAGVRSAD YIVAVVNSEP VTNNEVRARM ARVAQNIAEQ GGQMPPEALL AREVLERLIV
EKAQLQEAKD TGLRVDDYAV DQALTNVARQ NGLDKAGLQS RLRAEGVNEK QFREELRRQI
TLQRLRERDV DGRVRVTDAD IDRYLAEQRS GGADKAPAAV NLGHILISVP ENASPAEVAE
REARAKQAAE AARTQGDFLA VVKEFSDVPD GQGGGAMGMR PLDRYPELFT KAVGQTAQGG
IVGPFRSGAG FHVLKVLEKS QAGMPSVVTQ NHARHILLRI GDQMTEADAA KRLADYKRRV
DSGQASFESL AREFSQDGSA RNGGDLGWAS PGQFVPEFEQ VLNALQPGQV SDPLVSRFGV
HLIQLIERRQ AALTPREQRD MVRNVVRERK LETDYQAWLQ ELRGRAYVEY REPPQ