| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_6028 |
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| Symbol | |
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| ID | 5751659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6735221 |
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| End bp | 6736516 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641301170 |
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| Product | amidase |
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| Protein accession | YP_001567041 |
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| Protein GI | 160901459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCA GTACCCCTCT TGCAGCCACC GCCGTTGCGG CCGGGCTGCG CACCGACGGC
GCCCGCCTGT GGCAATCGCT GATGGACCTG GCGCGCATAG GCGCCACACC CAAGGGCGGC
GTGTGCCGCC TGGCGCTGAC GGACCTGGAC CGCCAGGGGC GCGATCTCTT CGTGCAGTGG
GCGCGCGAGG CCGGCTGCAG CATCCGCGTC GATGCCATCG GCAACATCTT CGCGCGCCGC
GCGGGCCTGG ACGATGCGCT GCCGCCCGTG ATGACGGGCA GCCACATCGA CACCCAGCCC
ACGGGCGGCA AGTTCGACGG CAACTACGGC GTGCTGGCCG GGCTGGAGGT GCTGCGCACG
CTCAACGATG GCGGCGTGCG CACGCGTGCC CCGGTGGAGG TGGCCGTGTG GACCAATGAG
GAAGGCTCGC GCTTCGTGCC CGTGATGATG GGCTCGGGCG TGTTCGTCAA TGCCTTCACG
CTGGAGCATG CGCTGGCCCA GCGCGATGCC CAGGGCGTGA GCGTGGACGA GGCGCTGCGC
GCCATCGGCT ATGCCGGGCC GGCCGGCCCG GCGCCTGCGG TGGGCGCGTA TTTCGAAGCC
CATATCGAGC AGGGTCCAGT GCTGGAAAAC CATGAACGCG TGATCGGCGT GGTCAGCGCC
GCGCTGGGCC AGCGCTGGTA CGACGTCAGC GTGCAGGGCA TGGAGGCCCA TGCCGGCCCC
ACGCCCATGG AGCTGCGCCA CGACGCCCTG CTGGCCGCCA GCTGCATCGT GGCCGAGGTC
AACCGCATCG CCCTGGACCG CCTGCCGCAT GCGCGCGGCA CCGTGGGATC GCTGGAGGTG
TTTCCCAACT CGCGCAACGT GATCCCGGGC GGCGTCAAGC TCAGCGTGGA CCTGCGTGCG
CCGGACGACG GCCAGTTGCT GGACATGGAC GCCGCACTGC GCGCGGCCTG CGAGCGCATT
GCCGCTGCGC GTGGCGTAAC CATTGGCGTG GAGCAGGTCG TCTACTTCCC GCCCCAGCCG
TTCACGCCGC ACCTGGTGGA GGCCGTGCGC ACCAATGCCG CCGACCTGGG CTACAGCGCC
ATGGACGTGG TCAGCGGCGC GGGCCACGAT GCCGTCTACC TGGCCCGCGT GGCGCCTGCG
GCCATGATCT TCGTGCCCTG CGCCGACGGC ATCAGCCACA ACGAGATCGA GGACGCCGAG
CCCGCCCACC TGGAGGCCGG CTGCAACGTG CTGCTGCGCG CCATGCTGGC GGCCGCGGGC
GTGGTGCAGG CAGCGGACGG CGGGGTGCCG GCATGA
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| Protein sequence | MDLSTPLAAT AVAAGLRTDG ARLWQSLMDL ARIGATPKGG VCRLALTDLD RQGRDLFVQW
AREAGCSIRV DAIGNIFARR AGLDDALPPV MTGSHIDTQP TGGKFDGNYG VLAGLEVLRT
LNDGGVRTRA PVEVAVWTNE EGSRFVPVMM GSGVFVNAFT LEHALAQRDA QGVSVDEALR
AIGYAGPAGP APAVGAYFEA HIEQGPVLEN HERVIGVVSA ALGQRWYDVS VQGMEAHAGP
TPMELRHDAL LAASCIVAEV NRIALDRLPH ARGTVGSLEV FPNSRNVIPG GVKLSVDLRA
PDDGQLLDMD AALRAACERI AAARGVTIGV EQVVYFPPQP FTPHLVEAVR TNAADLGYSA
MDVVSGAGHD AVYLARVAPA AMIFVPCADG ISHNEIEDAE PAHLEAGCNV LLRAMLAAAG
VVQAADGGVP A
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