Gene Daci_6027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6027 
Symbol 
ID5751658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6734478 
End bp6735188 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID641301169 
ProductABC transporter related 
Protein accessionYP_001567040 
Protein GI160901458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTC CCCTGCTTTC GGTCGAGGGC ATACACGCCC ACTACGGCAA GAGCCATGTG 
CTGCAGGGCG TGTCGCTGCA GGTGCAGGAC GGCGAACTGG TCACGCTGCT GGGCCGCAAC
GGCGCGGGCA AGACCACCAC GCTCAAGTCC ATCGCGGGGG TGATGCAGCC CTCGCAGGGG
CAGATCCGCT TCGGCGGCGA ACCCGTGCAC CGGCTGGCCA CGCACCAGGT GGCCCAGCGC
GGCATCTGCC TGGTGCCAGA GCACCGCGGC ATCTTCAAGC TGCTCACGGT GGAGGAGAAC
CTGCTGCTGG GCCAGCGCAA ACGCTCGCCC TGGCAACTGG CCGACATCTA CCGCATCTTC
CCGCGCCTCA AGGAGCGGCG CGGCAACGGC GGCGGCCAGC TGTCGGGCGG CGAGCAGCAG
ATGCTGGCCA TAGGCCGCGC CCTGATGAAC GCGCCGCGCC TGCTCATGCT GGACGAGCCC
GTCGAGGGCC TGGCGCCCGT GATCGTGGAG GAGATCGTGG CCCAGCTCAA GACCATCAAG
GCCGCTGGCG TGGCGATCTT GCTGGTGGAG CAGAACCTGG AGGTCTGCAC CCAGCTGGCC
GACCGCCACT ACATCATCGA ACAGGGTGCG ATTGCGCACG AGGCAGGCAA TGCCGCTTTC
CTTTCCGATG ACGCCATCAA GGACCGGTAT CTCGGTGTAG GGATCGCCTG A
 
Protein sequence
MSGPLLSVEG IHAHYGKSHV LQGVSLQVQD GELVTLLGRN GAGKTTTLKS IAGVMQPSQG 
QIRFGGEPVH RLATHQVAQR GICLVPEHRG IFKLLTVEEN LLLGQRKRSP WQLADIYRIF
PRLKERRGNG GGQLSGGEQQ MLAIGRALMN APRLLMLDEP VEGLAPVIVE EIVAQLKTIK
AAGVAILLVE QNLEVCTQLA DRHYIIEQGA IAHEAGNAAF LSDDAIKDRY LGVGIA