Gene Daci_6024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6024 
Symbol 
ID5751655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6731847 
End bp6732707 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content67% 
IMG OID641301166 
Productinner-membrane translocator 
Protein accessionYP_001567037 
Protein GI160901455 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCT ATCTGCTTCA GACCATCAAC GGGATCGGCA TAGGCATGCT GTATTTCCTG 
TTGGCCGTGG GCCTGTCCAT CGTTTTCGGC CTGCTGCGTT TCGTGAATTT CGCGCACGGT
GCCTTCTACC TGCTGGGCGC CTATTTCTGC TACCAGATGA CGCGCTGGGG CATGAGCTTC
TGGCTGTCCC TGGTCGTGGT GCCGCTGGCC GTGGGCGCGC TGGGCTGGCT GGTGGAAAAG
CTCATGCTGC GCCATGTGTA TGCCAAGGCG CATGAGTTCC ACATCATCGT CACCGTGGGC
CTGGCCCTGG TGGTGCAGGA GCTGGTGATC GTGCAATGGG GCCCGCTGGG CGACAGCGTG
GCCGTGCCCG ATCTGCTGCA GGGCGTGGTG ATGTGGGGCA GCTTCGTCTA TCCCAAGTAC
CGGCTGTTCG TGATCGGCTT CACCGCCGTG CTGGCCGTGC TGCTGTGGTG GCTGCTGGAG
GGCACGCGGC TGGGCAGCGC GGTGCGCGCG GGCAGCGAAT CGACCGAGAT GGTGTCCCTG
CTGGGCGTGA ACGTGCTGCG CATCTTCAGC CTGGTGTTCG CGCTGGGCGC GGCCACGGCG
GCGCTGGCCG GCGTGCTGGC TGCGCCCATA CGCGGCGCCG AGCCCTTCAT GGGCGTGGAG
GCGCTGGGCG TGGCCTTCGT GATCGTGGTC GTGGGCGGGC TGGGCAGCTT CGGCGGCGCC
CTGGTCGGCG GCCTGCTGAT CGGCATCGTG CAAAGCGTGA TGAGCACGCT GTGGCCCGAG
GGCGCGCGCC TGATGATCTA CGTGGCCATG GCCGCGGTGC TGCTGCTGCG ACCCCATGGC
CTGCTGGGCC GCAAAGGATG A
 
Protein sequence
MSIYLLQTIN GIGIGMLYFL LAVGLSIVFG LLRFVNFAHG AFYLLGAYFC YQMTRWGMSF 
WLSLVVVPLA VGALGWLVEK LMLRHVYAKA HEFHIIVTVG LALVVQELVI VQWGPLGDSV
AVPDLLQGVV MWGSFVYPKY RLFVIGFTAV LAVLLWWLLE GTRLGSAVRA GSESTEMVSL
LGVNVLRIFS LVFALGAATA ALAGVLAAPI RGAEPFMGVE ALGVAFVIVV VGGLGSFGGA
LVGGLLIGIV QSVMSTLWPE GARLMIYVAM AAVLLLRPHG LLGRKG