Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_6023 |
Symbol | |
ID | 5751654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6730445 |
End bp | 6731650 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641301165 |
Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001567036 |
Protein GI | 160901454 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTC GTCACCTCCT GCAACTCTCG GCACTGGGCG CATTGCCCGC ATCGCTGGGC CTGGGCCGCA GCGTCTGGGC GCAGTCCAAG GACAGCATCC AGTTCGCCTG CCCCGTGCCC ATGTCGGGCG CCTTCGCGGC CAACGGAAAG TATGCGGATC TGGGCATGAA GCTGGCCATC GAGCAGTACG GCAAGGCGCT GGGCCGCCCG CTGGCCTACA CCGTGCTGGA CACCGAGGGC AAGCCCGCCA CGGCCGTGCG CAAGCTGCAG GAGTCTTCGC AGCAGCAGGG CACGCGCTTC TTCGCAGGCG GCATCCTGTC GTCGGAGGCG CTGGCCATGG GCAAGGAGGC CGAGAAGACC GGCGGCATCT TCATCACCAC CGCAGGCGCC GACGAGATCA CGGGCAAGGA CTGCAACAGC GCCACCTTCC GCTGGTCGGC GCCCACCTTC GGCGCCATCG AGCAGACCGT GCGCCCGCTG GTCGAGGCCC TGCCCAAGGC CAAGCGCTGG TACACCATCA CACCGCAGTA CGTTTTCGGC GACGGCCTGC TGACGGCGGC CAAGAACATC TTCAAGGAAA AGGGCATCGA GCATGTGGGC AACAGCTACC ACTCGCTGAC CGAAAAGGAG TTCAGCGGCT ACCTGACCAA TGCCGTGGCC GCCAAGCCCG ACGTGCTGCT GCTGCTGAAC TTCGGCGCCC AGTCCTCGGA CACGCTGCGC CAGGCCATCA GCTTCGGCAT GAACAAGAAC ATGACCATCC TGATCGCCTG GGCCTCGGGG CTGGAGCAGT TCGAATCGCT GGGCGCCGAC CTGTGCGACG GCGTGTACTT CGGCGCCCAG TACTGGCACA CGGTGGACAC GCCGCTCAAC CGCGATCTGG TGCAGCGCTG CAACGACAAG TTCAAGGCCA ATCCCAACTA CAGCCTGGCC GGCCACTACA TCTGCACCAA GCTGATGATC GACGCCATCA TCAAGGCCGG CACGGCCGAC CCCAAGGCCG TGGTCGCCGC GCTGGAAGGC ATGAAGTACC AGGGCCTGAC GGGCGAGGAA GAGGTGCGCA AGGCCGACCA CCAGGTGCTC AAGAGCTACT ACCTGCTCAA GGGCAAGGCC AAGTCCAAGA TGAAGAACAA GGACGACTAC GTGGATGTGG TCAGCTCAGG CAAGTCCTTC CTGCCCGTAG ATCAGACCGG CTGCAAATTA GCTTGA
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Protein sequence | MQRRHLLQLS ALGALPASLG LGRSVWAQSK DSIQFACPVP MSGAFAANGK YADLGMKLAI EQYGKALGRP LAYTVLDTEG KPATAVRKLQ ESSQQQGTRF FAGGILSSEA LAMGKEAEKT GGIFITTAGA DEITGKDCNS ATFRWSAPTF GAIEQTVRPL VEALPKAKRW YTITPQYVFG DGLLTAAKNI FKEKGIEHVG NSYHSLTEKE FSGYLTNAVA AKPDVLLLLN FGAQSSDTLR QAISFGMNKN MTILIAWASG LEQFESLGAD LCDGVYFGAQ YWHTVDTPLN RDLVQRCNDK FKANPNYSLA GHYICTKLMI DAIIKAGTAD PKAVVAALEG MKYQGLTGEE EVRKADHQVL KSYYLLKGKA KSKMKNKDDY VDVVSSGKSF LPVDQTGCKL A
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