Gene Daci_6021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6021 
Symbol 
ID5751652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6728055 
End bp6729071 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content69% 
IMG OID641301163 
Producthypothetical protein 
Protein accessionYP_001567034 
Protein GI160901452 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAA CCCCTTTCGC ATCTTCCCGT ACCCCTGCCC TGTGGCGCGC CCTGGCCGGC 
GGCCTGGCGC TGGCGGCCAC GCTGGCGGCG CCCTTCGCCC ATGCCCAGGG CGCAGGCAGC
TATCCGTCCA AGACCATTCG CCTGGTCGTG CCCTTTGCGC CTGGCGGCTC CACCGACATC
CTGGGCCGCC TGCTGGCGCA AAAGATGGGC GAGAGCATGC ACACCACGGT GGTGGTGGAC
AACAAGCCCG GCGCCAACGG CACCATCGGC TGCGACCTGG TGGCCAAGGC GCCGGCCGAC
GGCTACACCG TGGTGCTGGG CGATGTGGGC TGCATGGCCA TGGCCAAGGG CCTGTACACC
AAGCTGCCCT ATGACCCGCT GCGCGACTTC GCGCCCATCA GCCTGGTGGC ACGCAGCCCG
CTGGTGCTCA CCGTGGGCGC GCAAAGCCCG TTCCACTCGC TCAAGGAGCT GACGGCGGCG
GCCCAGGCCC AGCCCGGCAA GCTCAACTAC CCCTCGTCGG GCACGGGCGG CCCCAACCAC
CTGGGCGCCG AGCTGTATGC CATGCAGGCC AAGGTCAAGA TCGGCCACGT GCCCTACAAG
GGCAGCGCGC CTTCCGTGGT CTCGCTGGCA GCCGGCGAGA CCGACTTCGG CTTTCTCACG
GCCGTGACGA TTGCCGCGCA GCTCAAGGCC GGCAAGGTGC GCGCCCTGGC CGTGGCCCAC
AACGAACGCC TGCAGTCCAT GCCCGACGTG CCCACCATGT CCGAGGCCGG CCTCAAGGAC
TTCACGGCCG ATGCCTGGTT CCTCGCGGCC GTGCCCGCAG GCACGCCCAA GCCCATCGTG
GACAGGCTCT ACGCCGAGAT CGCCAAGGCC CTGCCCGCGC CCGAGGTCAA GGAAAAGCTG
GACGCCATGG GCGTGCTGCC CTCGGGCCTC AAGCCCGATG CCTCGGCCCA GTTCCTGCGC
GTGGAAGTGG ACAAGTGGCG CGATGTGATC AAGAACGCGG GCATCACGCT GGACTGA
 
Protein sequence
MRQTPFASSR TPALWRALAG GLALAATLAA PFAHAQGAGS YPSKTIRLVV PFAPGGSTDI 
LGRLLAQKMG ESMHTTVVVD NKPGANGTIG CDLVAKAPAD GYTVVLGDVG CMAMAKGLYT
KLPYDPLRDF APISLVARSP LVLTVGAQSP FHSLKELTAA AQAQPGKLNY PSSGTGGPNH
LGAELYAMQA KVKIGHVPYK GSAPSVVSLA AGETDFGFLT AVTIAAQLKA GKVRALAVAH
NERLQSMPDV PTMSEAGLKD FTADAWFLAA VPAGTPKPIV DRLYAEIAKA LPAPEVKEKL
DAMGVLPSGL KPDASAQFLR VEVDKWRDVI KNAGITLD