Gene Daci_6011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6011 
Symbol 
ID5751642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6716362 
End bp6717576 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content71% 
IMG OID641301153 
Producthypothetical protein 
Protein accessionYP_001567024 
Protein GI160901442 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGAC GCCACTTTCT GTCCCTGGCC TCCACCCTGC CCTTTGCCGC CCACCTGGGC 
CGGCTGCAGG CCGCCACGCC CCGGCCAGCC ACGCCGCGCC TGCTGCTGGT GTTCCTGCGT
GGCGCCTATG ACAGCAGCAA CCTGCTCGTG CCCACGCACA GCGACTTCTA CTACGAGGCC
CGCCCCAGCA TCGCCATTGC CCGGCCCGGC GAGGCCCGGG GCGCCCTGGC GCTGGACGAC
CGCTGGGGCC TGCACCCGGT GCTGCAGGAC AGCATCCACC CGCTGTTCCA GGCAGGCCAG
GCCTGCTTTG TGCCCTTTGC GGGCACGCAC GACCTGTCGC GCAGCCATTT CGAGACGCAG
GACTCCATCG AGCTGGGCCA GGGCCTGGAC GGGCGCCGCA GCTACCAGTC GGGCTTTCTG
AACCGGCTGG CCCAGGTGCT GGGACAGGAT GGCCGCACGG CGGTATCGCC CATGGCCTTC
ACGCCCCAGC TTCCGCTGCT GCTGCGCGGC AGCCTGCCGG CCGCCAACAT GGCGCTGGCA
TCCGTGGGCA AGGGCGGCCT GGACGATCGC CGCAGCCAGG CCATTGCCGC CATGTACGCG
GGCACTGCCC TGGGCCCGGC CGTGCAGGAG GGCTTTGCGG TGCGTGATGC CGTGCAGCGC
AGCGTGCAGG AGGAAATGGA CCAGGCCGGG CGCAATGCCA TCAGCGCACG CGGCTTTGCC
CTGGTGGCGC AGCGCATGGC GGCCCTGATG CGCGAGCGCT TCGACCTGGG CTTCGTCGAT
GTGGGCGGCT GGGATACGCA CGTGGCCCAG GGCGGCGCCA CGGGCGCGCT GGCCGGGCGG
CTGGACGAGC TGGGCCGGGG CCTGGCCGGC TTTGCCCAGG AGATCGGCCC CGAGGCCTGG
CGGCATACGG TGGTGGTGGT GATCAGCGAG TTCGGCCGCA CCTTCCGCGA GAACGGCAAC
AAGGGCACGG ACCACGGCCA CGGCACGACC TACTGGCTGC TGGGCGGCGG GCTGTCCTCG
CGCGCTGGCG GGCGCATCGT GGGCGAGCAG GTCGAGGTCA ACCAGAAAAA CCTGTTCCAG
AACCGCGACC ATCCCGTGCT CAACGAGTAC CGCGCCGTGC TGGGCGGCCT GTTCCAGCGC
ATGTATGGAT TGAGCCCGGC CCAGCTGCAG CGCGTGTTCG AGGGCGTCAC GCCCCGCGAT
CTTCAGTTCA TCTGA
 
Protein sequence
MQRRHFLSLA STLPFAAHLG RLQAATPRPA TPRLLLVFLR GAYDSSNLLV PTHSDFYYEA 
RPSIAIARPG EARGALALDD RWGLHPVLQD SIHPLFQAGQ ACFVPFAGTH DLSRSHFETQ
DSIELGQGLD GRRSYQSGFL NRLAQVLGQD GRTAVSPMAF TPQLPLLLRG SLPAANMALA
SVGKGGLDDR RSQAIAAMYA GTALGPAVQE GFAVRDAVQR SVQEEMDQAG RNAISARGFA
LVAQRMAALM RERFDLGFVD VGGWDTHVAQ GGATGALAGR LDELGRGLAG FAQEIGPEAW
RHTVVVVISE FGRTFRENGN KGTDHGHGTT YWLLGGGLSS RAGGRIVGEQ VEVNQKNLFQ
NRDHPVLNEY RAVLGGLFQR MYGLSPAQLQ RVFEGVTPRD LQFI