| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_6004 |
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| Symbol | |
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| ID | 5751635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6709947 |
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| End bp | 6711200 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641301146 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001567017 |
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| Protein GI | 160901435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.457023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGAACT GGTCTTTGAT TTCCGGCTGG GATCCCGTCA TGCAGGCCCT GGCCGCGCTG
TGTGCGCTGG TGCTGCTGGC CCGCTCGGCG GGGTTTGTCG TGCAATGGCT GCTGCTGCGT
GTGCTTCCGC GCATGCGCAG CACGCTGGTG GAGATGGAAT GGGCGCAGGT GCTGCTGCAC
GACAGCGTGC TGCAGCGGCT GGCCAAGGCC GTGCCTTCGC TGGTCATGCA GTCGGGCGTG
CAGGCCATAC CGCAGCTGCA GCCGCAGTGG GCCACGCTGA TCCTGAACCT GGCCATCGCC
TGCACCATCT ACCACGTGGC CCGCGTGATC AGCGCCCTGC TCAACGCCAT GAACGAGGCG
CACGAGCTCA AGGAAGAGCG CAAGGCCACG CAGGCCCACT CGATCAAGAG CTATGTGCAG
CTGGGCAAGC TGCTGGTGTT CCTGATCGCC ATCGTGCTCA TCGTCGCCAC GCTGGTGGAC
CGCTCTCCGC TGTTGCTGCT GTCGGGCCTG GGCGCGGCCT CGGCCGTGCT GATGCTGATC
TTCAAGGACA CCATCATGTC CTTCGTGGCC GGCGTGCAGC TGGGCTCCAA CGACATGCTG
CGCGTGGGCG ACTGGATAGA GATGCCCCAG GTCGGCGCCG ATGGCTTCGT GATCGACATC
GCGCTGCACA CGGTGAAGGT GCAGAACTGG GACAAGACCA TCACCACCAT TCCCACCTGG
CGGCTGATGA GCGACAGCTA CAAGAACTGG CGCGGCATGT TCGAGTCGGG CGGGCGCCGC
ATCCGCCGCT CGCTGCACAT AGACGCCCAC ACCATCCGCC TGCTGACGCC CGAGCAGCGG
CAGAAACTGG CGCTGCTGGA GCCCCTGAAG GACCATTGGA CCCGCAGCGG CGACCTGCGC
ATGGCCGACG CGCCTGCAGG CAGCGAGATG GCCGCGCAGC AACTCAGCAA TCTGGCCGTT
TTCAAGGCCT ATGCATACGC CTACCTGCTG CGCCATCCGC ACATCCACAA GACGCCGAAC
ATGTTTTTGC TGGTGCGCAC CATGGAGCCT TCTCCCATGG GGGTGCCGCT GGAGCTGTTT
TGCTACACCA GCACCACGGT CTGGGTGGAG TACGAGGCCA TACAGGGCGC GATCTTCGAC
CACCTGATCG GCATGCTGCC GCTGTTCGGA CTCAGCCTGT ACCAGCGTTC CTCGGACCAT
GGCCAGCATC TGCGGCTGGC GGGCAGCGAG CGCTGGCCCG AAGGGCAGGA ATAG
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| Protein sequence | MLNWSLISGW DPVMQALAAL CALVLLARSA GFVVQWLLLR VLPRMRSTLV EMEWAQVLLH
DSVLQRLAKA VPSLVMQSGV QAIPQLQPQW ATLILNLAIA CTIYHVARVI SALLNAMNEA
HELKEERKAT QAHSIKSYVQ LGKLLVFLIA IVLIVATLVD RSPLLLLSGL GAASAVLMLI
FKDTIMSFVA GVQLGSNDML RVGDWIEMPQ VGADGFVIDI ALHTVKVQNW DKTITTIPTW
RLMSDSYKNW RGMFESGGRR IRRSLHIDAH TIRLLTPEQR QKLALLEPLK DHWTRSGDLR
MADAPAGSEM AAQQLSNLAV FKAYAYAYLL RHPHIHKTPN MFLLVRTMEP SPMGVPLELF
CYTSTTVWVE YEAIQGAIFD HLIGMLPLFG LSLYQRSSDH GQHLRLAGSE RWPEGQE
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