| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_6001 |
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| Symbol | holA |
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| ID | 5751632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6705279 |
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| End bp | 6706331 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641301143 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001567014 |
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| Protein GI | 160901432 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.107235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTG CCCTGAACCA GCTTGGCGGC CATCTGGCCA AGGGCCTGCG CCCGCTCTAT
GTGCTGCACG GCGACGAGCC GCTGCAGCAG CAGGAGGCGG CCGACGCCAT CCGCGCCGCC
GCGCGCGCGG CCGGCTATAC CGAGCGCAGC AGCTATACCG TGGCCGGCGC GCATTTCGAC
TGGAGCGCCG TGCTGGCGGC CGGTGGCTCG CTGTCGCTGT TCGCCGACCG GCAGATCGTC
GAGATCCGCA TTCCCTCGGG CAAGCCCGGC AAGGACGGCG GCGCCGCGCT GCAGCAGATC
GCCGAGTCCG CGCGGGGCAA CGACAGCACG CTCACCCTGG TCCTGCTGCC GCGCCTGGAC
AAGGCCACCA AGACGGGGGC CTGGTTCAGC GCGCTGGAGG CCCAGGGCAT GACGCTGCAG
ATCGATCCCA TTGAGCGCGC CCAGTTGCCG GCCTGGATCG CCCAGCGGCT GGCGGCCCAG
GGCCAGCGCG TGGCACCCGG CGAGGAAGGG CAGCGCACGC TGCAGTTCTT TGCCGACCGT
GTCGAAGGCA ACCTGCTGGC CGCGCACCAG GAAATCCAGA AGCTGGCGCT GTTGCATCCC
GAGGGTGAAC TGAGCCAGGC CCAGGTCGAG CAGGCCGTGC TCAATGTGGC GCGCTACGAC
GTGTTCAAGC TGTCGGAGGC CGTGCTGGGC GGGCAGTTGG CGCGCGTCTC GCGCATGCTC
GATGGCCTGC AGGCCGAAGG CACGGCCGAG GTGCTGGTGC ACTGGACCCT GGCAGAGGAC
ATCCGCGCCA TCTGCCGCGT GAGGGACGCC ATGGCCGCAG GCCAGCCCCT GCCGATGGCG
CTGCGCGCCC AGCGCATCTG GGGCGTCAAG GAACGCTTGT TCGAGCGCCT GCTGCCGCGC
ATCACTGACG CCCAGGCCGC GCGCCTGCTG CAATCGGCCC ACGCGGTGGA CGGCATCGTC
AAGGGCCTGG CCTTCGAAGG CTGGCCGCGC GACGGCTGGC AGGCCCTGCG CCGCCTGGCC
GTGGACCTGG CCCAGGCCGG CGCCAAGGGC TGA
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| Protein sequence | MQLALNQLGG HLAKGLRPLY VLHGDEPLQQ QEAADAIRAA ARAAGYTERS SYTVAGAHFD
WSAVLAAGGS LSLFADRQIV EIRIPSGKPG KDGGAALQQI AESARGNDST LTLVLLPRLD
KATKTGAWFS ALEAQGMTLQ IDPIERAQLP AWIAQRLAAQ GQRVAPGEEG QRTLQFFADR
VEGNLLAAHQ EIQKLALLHP EGELSQAQVE QAVLNVARYD VFKLSEAVLG GQLARVSRML
DGLQAEGTAE VLVHWTLAED IRAICRVRDA MAAGQPLPMA LRAQRIWGVK ERLFERLLPR
ITDAQAARLL QSAHAVDGIV KGLAFEGWPR DGWQALRRLA VDLAQAGAKG
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