| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5995 |
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| Symbol | |
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| ID | 5751626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6695898 |
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| End bp | 6697079 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641301137 |
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| Product | benzoate transporter |
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| Protein accession | YP_001567008 |
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| Protein GI | 160901426 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
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| TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00202849 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCTTTC TCCGTGACTT GAGTCCCTCC GCCTTTGCGG CCGGCTTCGT GGCCGTGCTC
GTGGGCTTCA CCAGCTCGGT GGCCCTGGTC TTCCAGGCCG CCCAGGCCTT CCATGCCACA
CCCGAGCAGA TCACCTCCTG GGTCTGGGCG CTGGGGCTGG GCATGGGCCT GTGCTCCTTG
CTGCCCTCGC TGATACTGCG CATGCCCGTC ATGGTCGCCT GGTCCACACC AGGCGCTGCC
GTGCTGGCCA CGGCGGGGCT TGCCGGAGGC TTTTCCATGG GCGAGGCCGT CGGCGCCTTC
ATCATCAGCG CGGGGCTGAT CATCCTGGTG GGTGTCACAG GCTGGTTCGA GCGCGTCATG
AACCGCATCC CCATGGAAAT CGCTGCCGCC CTCCTGGCGG GCGTACTTGC CAACTTCGGC
ATGCAGGCCT TTGCCGCCGC CAGGCACGCG CTGCCCCTGG TGCTGGTCAT GCTGCTGACC
TATCTGCTGT CGCGCCGCCT GGCACCGCGC TATGCGGTCA TCGCCACGCT GGCGGTCTCC
ATCGCCTGGG TGGCGCTCAC CGGCCAGATG CAATGGTCTG CCGTGCATGC AGGCCTTGCC
TGGCCGGTCT TCACCATGCC CGAGTTCTCC GTGCCCGCCC TGGTGAGCCT GGCCTTGCCC
CTGTTCGTCG TCACCATGGC TTCGCAGAAC CTGCCCGGCG TGGCCGTCAT CCGCGCCACG
GGCTACAACC TGCCCATCTC CCGCATCATC AGCATGACTG GCATCGCCAC CCTGGTGCTG
GCCCCCTTTG GCGGATACGC GCTCAACCTC AGCGCCATCA CCGCCGCCAT CTGCATGGGG
CCCGAGGCCC ATGAGGACAA ATCACGCCGC TATACGGCAG CGGCCGTCTG CGGCCTCTTC
TATATAGTCA TCGGCATCTT CGGCGCCGTG GTCACAGGGC TGCTCACCGC CTTCCCCAGG
GAACTGGTGG TCTGCATTGC GGGACTGGCC TTGCTGGGCT CCATCGGCAG CGGCCTGGCC
ACGGCCCTGC AGGGAGAGGA GCACCGGGAG GCGGCGCTGA TCACCTTCCT GGTCACGCTC
AGCGGCGTGG TGATAGCCGG AGTCGGCTCG GCGTTTTGGG GCGTGGTCGC AGGCAGCCTG
GCGCTATTTG TGCAACATTA CCGACGTGCA CGGGCCAGCT GA
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| Protein sequence | MRFLRDLSPS AFAAGFVAVL VGFTSSVALV FQAAQAFHAT PEQITSWVWA LGLGMGLCSL
LPSLILRMPV MVAWSTPGAA VLATAGLAGG FSMGEAVGAF IISAGLIILV GVTGWFERVM
NRIPMEIAAA LLAGVLANFG MQAFAAARHA LPLVLVMLLT YLLSRRLAPR YAVIATLAVS
IAWVALTGQM QWSAVHAGLA WPVFTMPEFS VPALVSLALP LFVVTMASQN LPGVAVIRAT
GYNLPISRII SMTGIATLVL APFGGYALNL SAITAAICMG PEAHEDKSRR YTAAAVCGLF
YIVIGIFGAV VTGLLTAFPR ELVVCIAGLA LLGSIGSGLA TALQGEEHRE AALITFLVTL
SGVVIAGVGS AFWGVVAGSL ALFVQHYRRA RAS
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