Gene Daci_5993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5993 
Symbol 
ID5751614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6682764 
End bp6683186 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID641301125 
ProductMerR family transcriptional regulator 
Protein accessionYP_001567006 
Protein GI160901424 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00000699442 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGCGG ACTCTCCAGC CATGTCGACC ACCTACACCA TCAGCGATCT TGCCAAGGAG 
TTCGATCTCA CGACCCGGGC CATCCGCTTC TATGAAGACA TGGGCTTGCT TGAGCCCGAG
CGCGCCGGGC CTGGCGGGCG CAATCGCGTC TACAGCGCGC GTGATCGCAC GCGTCTTCGC
CTGACCTTGC GGGCCAAGCG GCTGGGACTG TCTCTGAACG AAGCCAAGGA GATCATCGAT
CTCTACGACA GCCCCCGCGA CACGGGCGTG CAACTGCGCA AATTCCTGGA AGTGCTGGCT
GTGCATCGCC GCCAGCTCGA GGACCGCCTG GCCGATCTGC AGGCCAACCT GGCCGAGGTG
CGAGAGCAGG AATCCGAGGC CCGCACTCTG TTGAAGCACC TGGATGGGAA AAATGCTTCA
TAA
 
Protein sequence
MLADSPAMST TYTISDLAKE FDLTTRAIRF YEDMGLLEPE RAGPGGRNRV YSARDRTRLR 
LTLRAKRLGL SLNEAKEIID LYDSPRDTGV QLRKFLEVLA VHRRQLEDRL ADLQANLAEV
REQESEARTL LKHLDGKNAS