Gene Daci_5990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5990 
Symbol 
ID5751611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6680319 
End bp6680981 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content64% 
IMG OID641301122 
Productcarbonate dehydratase 
Protein accessionYP_001567003 
Protein GI160901421 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000572555 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACAA CCTCCATCGA AGAACTGTTT GTCCACAACC GCGAATGGGC CCAGCAGATG 
GAGCGTGACC GGCCCGGTTT CTTCACCGGG CTGTTGTCGC AGCAAAAACC CCGCTACATG
TGGATCGGCT GTTCCGACAG CCGCGTCCCT GCGAACCAGA TCACGGGCCT GGAGCCCGGC
GAGGTGTTCG TGCACCGAAA CGTGGCCAAC GTGGTCGTTC CCAGCGACCT GAACTGCCTG
TCCACCATCC AGTACGCGGT GGACCAGCTC AAGGTCGAGC ACCTGATGGT CGTGGGCCAC
TACGGCTGCG GCGGCGTGCT GGCGGCACTG GAAGATGTGC GCGTGGGCTT GGCCGACAAC
TGGATCCGCC ATGTGAAGGA TGTGCGCGAC AAGCACCAGG CGCTGCTGGC CAGCCTGTCC
CCGCAATGGC GCCACGATGC GCTGTGCGAA CTCAATGCCA TCGAGCAGGT CATCAATGTG
GCGCAGAGCA CGGTGATGCA GGATGCCTGG GCGCGCGGCC AGAAGGTCAC GCTGCACGGC
TGGTGCTATG GCCTCAAGGA CGGCCTGATC ACCAATCTGC AGATGACCGT GCCCGGTGTC
GGCGGCATCG CCAACATCCA TGCCGAGGCT GTCGAGCTGG TCGCCAGCCG CCAGCGCGAC
TGA
 
Protein sequence
MSTTSIEELF VHNREWAQQM ERDRPGFFTG LLSQQKPRYM WIGCSDSRVP ANQITGLEPG 
EVFVHRNVAN VVVPSDLNCL STIQYAVDQL KVEHLMVVGH YGCGGVLAAL EDVRVGLADN
WIRHVKDVRD KHQALLASLS PQWRHDALCE LNAIEQVINV AQSTVMQDAW ARGQKVTLHG
WCYGLKDGLI TNLQMTVPGV GGIANIHAEA VELVASRQRD