Gene Daci_5976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5976 
Symbol 
ID5751597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6666338 
End bp6667312 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content70% 
IMG OID641301108 
ProductAraC family transcriptional regulator 
Protein accessionYP_001566989 
Protein GI160901407 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCT ACGAACGCCG GGGCATCAGC GCCCTGTCCG CCCTGGAGAA GGCACAAATC 
GCGCCAGACT CCGTCAAAGA GCGCAACGAG TGCATCACGG CGCTGCAGAT GGAGGCACTG
TCCGATGCCG CCATGCGCGA ACTCGACGAC GAGGCCCTGG GCTGGTTCTC CCGGCGCCTG
CCCTGGGGCA GCTACGGCAT GCTGGCACGC GCCAGCATGG GCAGCGAGCA GCTGGGCCTG
GCGCTGGCGC GCTGGTGCCG CCACCATGGC CTGCTGGCCG ACGACATCCG CCTCACGCTG
ACGCAGGAAG ACGGCTTGGC CACGCTGGCC ATCGAGGAGC TGTCCACGCT GGGCGCCATG
CGCGAGTTCT GCCTGCTGTC GGTGCTGCGC AATATCCACG GCCTGGCCAG CTGGTTCATC
GATGAGCCGC TGCCGCTGCG GCGCGCCTGC TTTCCCTTCG ATCCCCCGCC GCATGCGGGC
GTGTATGCGC TGCTGTTCCC GCCGGGCGAG GTGGAGTTTG GCGCGGCCCG GGCCTGCCTG
CAGTTCGACG CGCGTTTTCT GGATATGCCG CTGACGCGCG ACGAGCCTGC GCTGCAGCGC
ATGCTGCAGC GCGCCCTGCC GCTGCAGGTG CGCCCCTACC GGCGCGAGCG CCAGCTGGTG
CAGCGCGTGC GCCAGCTGCT GGCCGCCGAC GCCGAATGCC TGCAGACGGC CGACACGCTG
GCGCGCCAGC TGCACCTGTC CCAGCGCAGC CTGCACCGCC AGCTCAAGGA AGAAGGCGCC
TCGCTGCAGG CGCTCAAGGA CGAGGTGCGG CGCGAGCGTG CCGTGGCCCT GCTGCTGCGC
ACCAGCCGGC CCATCAAGCG CATCGCGCAG TCCTGCGGCT TTCTCAACGA CAAGAGCTTC
ATCCGCGCCT TCCGGCTGTG GACGGGGCTG TCGCCTTCCG AATTCCGCAA GAGCGCGCGA
GCCCGGCCCG AGTGA
 
Protein sequence
MLAYERRGIS ALSALEKAQI APDSVKERNE CITALQMEAL SDAAMRELDD EALGWFSRRL 
PWGSYGMLAR ASMGSEQLGL ALARWCRHHG LLADDIRLTL TQEDGLATLA IEELSTLGAM
REFCLLSVLR NIHGLASWFI DEPLPLRRAC FPFDPPPHAG VYALLFPPGE VEFGAARACL
QFDARFLDMP LTRDEPALQR MLQRALPLQV RPYRRERQLV QRVRQLLAAD AECLQTADTL
ARQLHLSQRS LHRQLKEEGA SLQALKDEVR RERAVALLLR TSRPIKRIAQ SCGFLNDKSF
IRAFRLWTGL SPSEFRKSAR ARPE