Gene Daci_5972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5972 
Symbol 
ID5751593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6660083 
End bp6660868 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID641301104 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001566985 
Protein GI160901403 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA CCGCACTGAC CCTCGAATTC CAGGGCCCCC TGGCCACCAT CACGCTGACC 
CAGCCCGAAG TGCGCAATGC CTTCAGCGAC GAGGTCATCG CCGACATCAC CCAGGCCTTC
CACTCCGTGG GCAAGCGCAG CGACGTGCGC GCCGTGGTGC TGGCCGCCGA GGGCCCGGCC
TTTTGCGCAG GCGCCAACCT CAACTGGATG CGCCGCATGG CCGACTACTC GCGCGACGAG
AACCGCGAGG ACGCCGGCCT GCTGGCCGAA ATGCTGCGGG TGATCTACGA ATGCCCGCAG
CCCACCATCG CGCGCGTGCA GGGCGATGTC TATGCGGGCG GCATGGGCCT GGTCGCTGCC
TGCGACATGG CCGTGGCCGC CGAGGGCGCG GGCTTTTGCC TGTCCGAGGT GAAGATCGGC
CTGATCCCCG CCACCATCAG CCCCTACGTG ATCCGCGCCA TGGGCGCGCG CGCCGCCCAC
CGCTACTTCC TGACCGGTGA GCGCTTCGAC GCGGCCGAGG CGCTGCGCAT CGGCTTCGTG
CACCGCGTGG TGGCGGCAGA CGAGCTGGAC AACGCCGTGG ACGGCCTGCT CAAGCACCTG
GTCAGCGCCG GTCCCGCCGC CGCCCGCGCC TGCAAGCGCC TGGTGATCGA CGTGGCCGAG
CGCGAGATCA ACGAGCAGCT GATCGCCGCC ACCGTCGAAG GCATCGCCGA CATCCGCGCC
AGCGCCGAGG GCAAGGAGGG CGTGCAGGCC TTCCTGCAAA AGCGCAAGCC GGCCTGGCTG
GCCTGA
 
Protein sequence
MKTTALTLEF QGPLATITLT QPEVRNAFSD EVIADITQAF HSVGKRSDVR AVVLAAEGPA 
FCAGANLNWM RRMADYSRDE NREDAGLLAE MLRVIYECPQ PTIARVQGDV YAGGMGLVAA
CDMAVAAEGA GFCLSEVKIG LIPATISPYV IRAMGARAAH RYFLTGERFD AAEALRIGFV
HRVVAADELD NAVDGLLKHL VSAGPAAARA CKRLVIDVAE REINEQLIAA TVEGIADIRA
SAEGKEGVQA FLQKRKPAWL A