| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5969 |
|---|
| Symbol | |
|---|
| ID | 5751590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6656206 |
|---|
| End bp | 6657126 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641301101 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001566982 |
|---|
| Protein GI | 160901400 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTGA CTTTCTGCTG CGAAGACACC AGGCCCGACG CCTGGCTGCA AGGACTGCGC
GCGGCCCTGC CGGGCGCCGA GGTGGACATC TGGTCGCCGG GCGCGCCGCA GGCCGACTAC
GCCCTGGTCT GGGCGCCACC CCAGCGCTTC ATCGACGAGC AGCCGGGCCT CAAGGCCGTG
TTCAACATCG GCGCCGGCGT CGATGCGCTG CTGCCGCTGC GCCTGCCGCC CGACCTTCCC
GTCTACCGCC TGGAGGACGC CGGCATGGCC GTGCAGATGG CCGAATACGT CAGCCAGGCC
GTGATCCGCT TCTTCCGGGG CCTGGACGGC TACGAGGCCG ACATGGCCGC CGGCCTGTGG
CAGCACCGGC CCAATCCCCG GCGTGCCGAC TACCCCGTGG GCGTCATGGG GCTGGGCCGC
ATGGGCGAGC GCGTGGCGCG CGCGCTGACG GTGTTCGATT TCCCCGTCAA CGGCTGGAGC
CGTACGCCGC ATGCCATCGA CGGCGTGCGT GGCTTCTGCG GCCCGCAGGA CTTCGACGCC
TTTCTGCGCG CCACCCGCAT CCTCGTCAAC CTGCTGCCGC TGACGCCCGA GACCGACAGC
ATCATCGACG CGCGCAGCCT GGCCCTGCTG CAGCCGGGCG CCTATGTCAT CAACGTGGCA
CGCGGCGGCC ATGTGGCGGA CGAGGACCTC ATCGCCGCCA TCGACGGGGG CCATGTGACC
GGCGCGTTGC TCGATGTGTT CCGCACCGAG CCGCTGCCCG ACGGCCATGC CTTCTGGCGG
CATCCGCGCA TCACGCTCAC GCCCCACACC TCGGCCCGCA CCCTGGCGCG CGACAGCGTG
GAGCAGATCG TGGGCAAGGT CGCGGCGCTG AGCCGGGGCG AGGCCGTGAG CGGCCGCGTG
GACCTGCAGT GCGGCTACTG A
|
|---|
| Protein sequence | MRVTFCCEDT RPDAWLQGLR AALPGAEVDI WSPGAPQADY ALVWAPPQRF IDEQPGLKAV
FNIGAGVDAL LPLRLPPDLP VYRLEDAGMA VQMAEYVSQA VIRFFRGLDG YEADMAAGLW
QHRPNPRRAD YPVGVMGLGR MGERVARALT VFDFPVNGWS RTPHAIDGVR GFCGPQDFDA
FLRATRILVN LLPLTPETDS IIDARSLALL QPGAYVINVA RGGHVADEDL IAAIDGGHVT
GALLDVFRTE PLPDGHAFWR HPRITLTPHT SARTLARDSV EQIVGKVAAL SRGEAVSGRV
DLQCGY
|
|---|
| |