Gene Daci_5967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5967 
Symbol 
ID5751588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6654199 
End bp6655053 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content72% 
IMG OID641301099 
Producthypothetical protein 
Protein accessionYP_001566980 
Protein GI160901398 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGGTCCCCAC GTCAACCACG TCGCAGTGGA GCGACCCGCT GATCGTCACC 
GTGGCCCCCA ACGGCGCCTA CAAGCAGCCG GCCGACCACC CTGCACTGCC GATCACGCCA
CAGAGGCTGG CCGCCACGGC ACGCGCCTGC CTGGATGCCG GCGCGGCCAT GATCCACATG
CACATCCGCG ACGCCCAGGG GCGCCACAGC CTGGATGTGG ACGGCTACCG CGAAGCCTGG
CGCGTGGTGC GCGAGGCCGT GGGCACGGAC ATGGTGGTGC AGATCACCAG CGAGGCCGCA
GGCGTCTACC GCGCGCCCGA GCAGATCGCC ATGGTGCAGG CGCTGCGGCC CGAGGCCGTC
TCCATCGGCC TGCGCGAGAT CGACCAGCCC GAGATCGGCG ATGCGGGACT GGCGCACTTT
TTCACGGGCC TGGTGCGCGA CCAGGTCATG GTGCAGGTCA TCCTCTACGA CGTGGCCGAC
CTGCGCCGCT GGCAGGCGCT GCGCGCCCAG GGCGTGGTGC CCGAGGCGCC CTGGCTCCTG
CTCTTCGTGC TGGGCCGCTA CAGCGCGGGC CAGACCTCGC GGCCCCAGGA CCTGCTGCCC
TTTCTTGCGG CGCATGACGG CGGCGAGCCC TGGGCCGTGT GCGCCTTCGG CTCCACGGAA
AACACCTGCA TCGCGGCAGC CGCCGCGTTT GGCGGCCATG CGCGCGTGGG CTTCGAGAAC
AACCTGCTGG CCAAGGACGG CCACACCGCG CCCGACAACG CCGCCCTGGT CCGCCAGGCC
GTGGTGTCCG CACAGGCGCT GGGCCGCCCC CTGGCCACGG CCGACGACAT ACGCCAGCGC
TTCACACCGG GCTGA
 
Protein sequence
MSTPVPTSTT SQWSDPLIVT VAPNGAYKQP ADHPALPITP QRLAATARAC LDAGAAMIHM 
HIRDAQGRHS LDVDGYREAW RVVREAVGTD MVVQITSEAA GVYRAPEQIA MVQALRPEAV
SIGLREIDQP EIGDAGLAHF FTGLVRDQVM VQVILYDVAD LRRWQALRAQ GVVPEAPWLL
LFVLGRYSAG QTSRPQDLLP FLAAHDGGEP WAVCAFGSTE NTCIAAAAAF GGHARVGFEN
NLLAKDGHTA PDNAALVRQA VVSAQALGRP LATADDIRQR FTPG