Gene Daci_5962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5962 
Symbol 
ID5751583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6650441 
End bp6650686 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content67% 
IMG OID641301094 
Producthypothetical protein 
Protein accessionYP_001566975 
Protein GI160901393 
COG category[R] General function prediction only 
COG ID[COG3313] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.166337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGTC CCAAGGAAAT GCTGGCCCAG AAGGCCCGCG CCGCATACGC TCCGCGTGCC 
GAAGAGGAAC CCGTGCTCTC GCCCTGCATC TCGGTCTGCC GCATGACGCC CGACCGAAGC
CATTGCGAAG GGTGCTTTCG CACCATCGAC GAGATCCGCG CCTGGTCCAA GTCCGATGCG
CCGCAGCGCC TGGCGATCTG GAACGCGCTG CTGGAGCGCG CAGGCATCGC GGCCACCGCA
CCCTAG
 
Protein sequence
MMGPKEMLAQ KARAAYAPRA EEEPVLSPCI SVCRMTPDRS HCEGCFRTID EIRAWSKSDA 
PQRLAIWNAL LERAGIAATA P