Gene Daci_5961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5961 
Symbol 
ID5751582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6649782 
End bp6650417 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content71% 
IMG OID641301093 
ProductDSBA oxidoreductase 
Protein accessionYP_001566974 
Protein GI160901392 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.711494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA TCACCTTCCA TCTCGACTTC ATCTCGCCCT ATGCCTGGCT GGCGTTCGCG 
CAACTGCCGC AGGCGCTGCA GGGCATCAGC CACCACATGC AGTACCGCCC CGTGCTGCTG
GGCGCGCTGC TGCAGCGCCA CGCCAACCCG GGACCGGCCG GCATCGCGGG CAAGCGCGAA
TGGACCTACC GCCATGTGAG CTGGCTGGGC CATGCCACGG GCGTGGGGCT GGACATGCCG
GCCCGCCATC CGTTCAACCC GCTGCCGCTG CTGCGCCTGG CGCTGGAGTG CAGCGATGAC
GGCACCATCA ACCGCTTTGT GGCGGACGCC GTGCTGCGCC ATGTCTGGCT GGGCGGCGCC
GACGCGCTGG ACCCCGCGCG GCTCGACGCA CTGCGCGCCA CGCTGGCGCC GCAGCTGCGC
ACGGATGCGG CGGACAACGC CAAGCGCCTG CTGCGCGAGA ACACCGAGGC CGCCGCCGCC
CGGGGCCTGT TCGGCGTGCC GGCCTGGGAG GTCGATGGCC GCCTCTTCTG GGGCCTGGAC
AGCTTGCCCA TGCTGCGTGC CTACCTGGAA GGCGATGGCT GGTTCGACAG CGGCTGGGAC
GCGGCTGCAA GCGTGGAGCA AGGCCTGAAG GTTTGA
 
Protein sequence
MKQITFHLDF ISPYAWLAFA QLPQALQGIS HHMQYRPVLL GALLQRHANP GPAGIAGKRE 
WTYRHVSWLG HATGVGLDMP ARHPFNPLPL LRLALECSDD GTINRFVADA VLRHVWLGGA
DALDPARLDA LRATLAPQLR TDAADNAKRL LRENTEAAAA RGLFGVPAWE VDGRLFWGLD
SLPMLRAYLE GDGWFDSGWD AAASVEQGLK V