| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5947 |
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| Symbol | |
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| ID | 5751568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6628230 |
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| End bp | 6629882 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641301079 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001566960 |
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| Protein GI | 160901378 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACC CCATCGACAG CTATGACTAC GTGATCGTGG GAGCAGGCTC TGCCGGCTGC
GTGCTGGCCG CGCGCCTGTC CGAGGACCCG GCCACGCGGG TGCTGCTGCT GGAGGCCGGC
CCGCCGGACC GCTCGCCCTG GATCCACCTG CCCATCGGCT ACGGCAAGAC CATGTGGAGC
CCCGTCTACA ACTGGAAGTT CGAGACCGAC CCGGACCCCA ACATGAACGG CCGGCGCATC
TACTGGCCGC GCGGCCGCAC GCTGGGCGGC AGCAGCTCCA TCAATGGACT GATCTACGTG
CGCGGCCAGC GCGAGGACTA CGACCACTGG GCGGCGCTGG GCAATGCAGG CTGGTCGTAT
GAGGAGGTGC TGCCCTACTT TGTGAAGTCC GAAGGCAATG CGCGCGGCGC CTTCCCGGGC
CATGGCGCGG ACGGGCCGCT CAAGGTCTCG GACATCGGCG CACAGCATCC GCTGATCGAG
GCCTTCATTG CCGGTGCAGG CCAGGTCGGC GTGCCCCGCA CCGAGGACTT CAACGGCCGC
GACCAGGAGG GCGCGGGCTA CTACCAGCTC ACCACCCACA AGGGCCTGCG CTGCAGCACG
GCCAAGGCCT ATCTGGGCGA GGCCCGGCGC CGCCCCAATC TGCGCATAGA GACCGACGCC
ATGGCCACGC AGTTGGTGCT GCGCGGCCGG CGCGCCACCG GCATCCGCTA CCGGCAAGGC
GGGCAGGAGC GCCAGGCCCA GGCGCGGGCC GAGGTGATTC TGTCGGCAGG CGCCATCCAG
TCGCCGCAGC TGCTGCAACT GTCGGGCATA GGCCCGGCCG CGCTGTCGCA GTCCCTGGGA
ATTCCCGTGG TGCACGATCT GCCGGGCGTG GGCGAGAACC TGCAGGACCA TCTTCAGATA
CGCCTGGGCT ACGAATGCAG CCAGCCCATC ACCACCAATG ACCAGCTCAA TTCCTGGGTG
GGCAGGACCA GGCTGGGGCT GGAATGGCTG CTGTTCCGCT CGGGCGCGCT GGCCGTGGGC
ATCAACCAGG GCGGCTGCTT CATGCGTGCG CTCAGGGACG AGCAGGGCCG GCCCGTGGCC
GCCACACCCG ACATCCAGTT CCACGTCTCC ACGCTGTCGG CCGACATGGC AGGCGGCCAG
GTCCATCCGT ACTCGGGCTT CACCATGTCG GTCTGCCAGC TGCGACCCGA GTCACGCGGG
CAGTTGCGCA TCCGCTCGCG CGATGCCTTC GAGCCGCCCT CCATCCAGCC CAACTACCTG
GCCACCGACC TGGACCGCCG CACCAACGTG GCGGCCGTGC GCGCGGCACG CGCCATTGCC
GACACGCCGG CCATGCGCCC TTTCGTGAAG CGCGAGGTCA AGCCCGGCCC CGATGCGCAC
AGCGATGCGG AACTGCTGGA GTTCTGCCGC AACCACGGCG CCACCATCTT CCACCCCAGC
GGCACCTGCC GCATGGGCAG CGACGTCCTG GCCGTGGTCG ATGCGCGCCT GCGCGTGCAC
GGCATGGCCG GCCTGCGCGT GGTCGATTGC TCGGTCATGC CCACCCTGGT CTCGGGCAAC
ACCAACGCGC CCGTGGTGAT GATGGCCGAG AAGGCCGCCG ACATGGTTCG CGAAGACAGG
CACGGAGAGA CAGGGCAGCT CAAGGTCGCA TGA
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| Protein sequence | MPDPIDSYDY VIVGAGSAGC VLAARLSEDP ATRVLLLEAG PPDRSPWIHL PIGYGKTMWS
PVYNWKFETD PDPNMNGRRI YWPRGRTLGG SSSINGLIYV RGQREDYDHW AALGNAGWSY
EEVLPYFVKS EGNARGAFPG HGADGPLKVS DIGAQHPLIE AFIAGAGQVG VPRTEDFNGR
DQEGAGYYQL TTHKGLRCST AKAYLGEARR RPNLRIETDA MATQLVLRGR RATGIRYRQG
GQERQAQARA EVILSAGAIQ SPQLLQLSGI GPAALSQSLG IPVVHDLPGV GENLQDHLQI
RLGYECSQPI TTNDQLNSWV GRTRLGLEWL LFRSGALAVG INQGGCFMRA LRDEQGRPVA
ATPDIQFHVS TLSADMAGGQ VHPYSGFTMS VCQLRPESRG QLRIRSRDAF EPPSIQPNYL
ATDLDRRTNV AAVRAARAIA DTPAMRPFVK REVKPGPDAH SDAELLEFCR NHGATIFHPS
GTCRMGSDVL AVVDARLRVH GMAGLRVVDC SVMPTLVSGN TNAPVVMMAE KAADMVREDR
HGETGQLKVA
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