| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5942 |
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| Symbol | |
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| ID | 5751563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6622341 |
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| End bp | 6623843 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641301074 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001566955 |
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| Protein GI | 160901373 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA ACTGGAACGA CCCGACGGCG ATCATGTTCG CCATCTACCT GGTCGCCATG
CTCGGCATCG GCGCCATCGG CTACTTCAGC ACCAAGAATC TTTCCGACTA CATCCTGGGC
GGCCGCAGCC TGGGCAGCTT CGTGACGGCG CTGTCGGCCG GCGCCTCGGA CATGAGCGGC
TGGCTGCTGA TGGGCCTGCC CGGAGCCATC TACCTGTCCG GCCTGTCGGA AGCCTGGATC
GCCATCGGCC TGATCCTGGG CGCCTACCTG AACTGGCGCC TGGTGGCGGC GCGGCTGCGC
CTGTACACCG AGCGTGCCGG CAATGCGCTG ACCCTGCCCG ACTACCTGGC CAACCGTTTC
GAGGACCACT CCAACGTGCT GCGCATCGTG ACGGCCGTGG TGATCCTGGT GTTCTTCACG
CTGTACTGCG CCTCGGGCGT GGTGGCGGGC GCGCGCCTGT TCGAGAACAT GTTCGGCATG
CCCTACAGCA CGGCCCTGTG GGTGGGCGCG CTGTGCACCA TCGCCTATGT GTTCATCGGC
GGCTTCCTGG CCGTGAGCTG GACGGACACC ATCCAGGCCT CGATGATGAT CACGGCGCTG
ATCCTGGCGC CCGTGATCGC CTGGCTGGCC GTGCAGGGCC ATCTGCAGCC GGGCCAGGAC
CTGCACGCCA TCGTGGCGGC AGAGAAGTTC GACCTGTTCC GTGGCGCCAG CTTCGTGGGC
GTGGTCTCGC TGCTGGCCTG GGGCCTGGGC TACTTCGGCC AGCCGCACAT CCTGGTGCGC
TTCATGGCGG CCTCGTCGGT GCAGACCATT CCCTCGGCCC GCCGCATCAG CATGACCTGG
ATGATCCTGT GCCTGGCCGG CGCCGTGGCC GTGGGCTTCA TCGGCATCCC CTACTTCGCG
GCCAACCCCG GTGGCGCCGC CGCCGTGAAC GCCAATGCCG AGACGGTGTT CATGGAGATC
ACCAAGCAGC TGTTCAACCC CTGGATCTCG GGCGCGCTGC TGGCGGCCAT CCTGGCGGCC
GTGATGAGCA CGCTGTCGTG CCAGTTGCTG GTGTGCTCCA GCGCGCTGAC CGAGGACATC
TACCGCACCT TCCTGCGCAA GAATGCCAGC CAGATCGAAC TGGTCTGGAT CGGCCGCGCC
ATGGTGCTGC TGGTGGCCTT GATCGCCATC GCCATCGCCA GCAACCCCGA CTCCAAGGTG
CTGGGCATGG TCAGCTACGC CTGGGCCGGC TTCGGCGCCG CCTTCGGCCC GGTGATCATC
CTGTCGCTGT TCTGGAGCCG CATGACGCGC GGCGGCGCGC TGGCCGGCAT CATCACCGGC
GCCGTGACCG TGCTGGTGTG GAAGCAGTTC GGCTGGCTGG GCCTGTACGA GATCATCCCC
GGCTTCATCC TGGCCTGGCT GGCCACGGTG GTCGTCAGCC GCATGGGCCC TGCGCCTTCG
CAAAGCATCC TGAAAGCGCA TGCGGCGGTG GAGAGCGAGT TCGAGCGGAT CGGGGCACGC
TGA
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| Protein sequence | MQFNWNDPTA IMFAIYLVAM LGIGAIGYFS TKNLSDYILG GRSLGSFVTA LSAGASDMSG
WLLMGLPGAI YLSGLSEAWI AIGLILGAYL NWRLVAARLR LYTERAGNAL TLPDYLANRF
EDHSNVLRIV TAVVILVFFT LYCASGVVAG ARLFENMFGM PYSTALWVGA LCTIAYVFIG
GFLAVSWTDT IQASMMITAL ILAPVIAWLA VQGHLQPGQD LHAIVAAEKF DLFRGASFVG
VVSLLAWGLG YFGQPHILVR FMAASSVQTI PSARRISMTW MILCLAGAVA VGFIGIPYFA
ANPGGAAAVN ANAETVFMEI TKQLFNPWIS GALLAAILAA VMSTLSCQLL VCSSALTEDI
YRTFLRKNAS QIELVWIGRA MVLLVALIAI AIASNPDSKV LGMVSYAWAG FGAAFGPVII
LSLFWSRMTR GGALAGIITG AVTVLVWKQF GWLGLYEIIP GFILAWLATV VVSRMGPAPS
QSILKAHAAV ESEFERIGAR
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