| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5940 |
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| Symbol | |
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| ID | 5751561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6617045 |
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| End bp | 6618052 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641301072 |
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| Product | fimbrial protein |
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| Protein accession | YP_001566953 |
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| Protein GI | 160901371 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.201564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGT ACAAGCTTTT CGCATTTTCC ATGGGAATCA TTTTTTCCAC CATTTCCGCA
TCCCATGCAG CATTCTGCAT GCCGGCTGAC TCCAATCCGA CCACTGATGG AAAGAACCAT
TACATTGCAT CTTACCCCGT GAATCAGGCC CTGAGTTTAC CCATCAACAT AAACTCCGAA
CCAAACGGCA AAGTGTTTGC AGTAATTTCG CTTAACCCAG TAATCGACAA CAAGAGATAT
TCCTCAATAC CTGCGCGAGT GGTTTGCTCA GGCTTTGGCA GACCTTCATT TTCAGGATTC
GGAGTCCCTG ATGACAGAAT CTATCCCAGC AATGTCCCCG GAATAGGATT ACGCATGTCA
ATGGAAGGGA TTGGAACAAT TCCCAGCGAT CGACCTACAC TAACGAATTC ATACACCATT
CCCGAAGGAG AAAAATCCAC CATTACAATA GATTTCATAA AAACAGGACC CATCAGTACT
ATTTTTGGAG AGATCCAACT GGCAGGACCA TACATGGAAA TGAAAATTGC CGGAGCACTC
GCCGCGCAAT ACGTTTTCTC CGGTGTCACC CTGGTCCCCA TCAATCCCAC CTGCACGCTG
GTGTCGGACA GCATCAGCGT ACCGCTGGGC ACGCATCCCG ACACACGCTT CACGGGTTTG
GGTGCGACCA CGGACAAGGT GCCCTTCTCC ATCCAGCTGA GCTGCTCCGG CGGCGACCCG
AACACCCAGA TCAAGCCTTT CGTGACGCTG TCGGGCACGA CGGACACGCA AGTCCCCTCG
GTGCTGGCGC TGACCGGCTC GCAGGTCAGC GGCGTTGGCG TGGAGGTGCT GAGAAATGGC
GCGATCCAGG GCTTTGGCGC AGCCAACGGC TGGCAGGCGG GCACGATTTC GCAGGGCACG
GCAAATTTCC AGATCGACCT GGAGGCGCGC TACCGGCAGA TCAGGAATAC CGTGAGCGGC
GGTGGCAGCG CCAATGCCTT GGCGACCTTC ACCATCGACT ACCAGTAG
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| Protein sequence | MNMYKLFAFS MGIIFSTISA SHAAFCMPAD SNPTTDGKNH YIASYPVNQA LSLPININSE
PNGKVFAVIS LNPVIDNKRY SSIPARVVCS GFGRPSFSGF GVPDDRIYPS NVPGIGLRMS
MEGIGTIPSD RPTLTNSYTI PEGEKSTITI DFIKTGPIST IFGEIQLAGP YMEMKIAGAL
AAQYVFSGVT LVPINPTCTL VSDSISVPLG THPDTRFTGL GATTDKVPFS IQLSCSGGDP
NTQIKPFVTL SGTTDTQVPS VLALTGSQVS GVGVEVLRNG AIQGFGAANG WQAGTISQGT
ANFQIDLEAR YRQIRNTVSG GGSANALATF TIDYQ
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