Gene Daci_5922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5922 
Symbol 
ID5751543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6590081 
End bp6590944 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content72% 
IMG OID641301054 
Producthypothetical protein 
Protein accessionYP_001566935 
Protein GI160901353 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCG CTGGTGCCGT CCCCCGTTTC TCCCTGGCCG CACTGCTGTC GCTGGCGGCC 
GCATCCTGCC ATGCGCAGGC AGAGACCTCC CCCGTCAGCG CTGCCAGCGC CGCTGCCCAG
GAATCGCCCG CACCCGCCTA CGCCCTCACC GGCAGCGTGA CGCTGCTCAG CGACTACCGT
TTCCGTGGCA TCTCGCAAAG CTGGATGGGG CCTGCGCTGC AGGGCGGGCT GGAGCTGTCG
CTGCCGCGCG GCGCCTACCT GGGCGTGTCC GGCTCCAGCG TGTCGCGCCA CAGCTATCTG
GACGGCCGCG CGCTGGAGCT GGACCTGTAC GGCGGCTGGC GCACCGAATT GCCGGCGGGC
TGGACGGGCG ACATCGGCCT GCTGCACTAC AACTACCCCG GCGCGCGCGT GCCCCGGGGC
GATGGCGGCG GCGGTGTGCG CTACGACACC ACCGAGGCCT ATCTGGCTGC CAGCCACGGC
GGCTTCAGCG CCAAATGGTC GCTGGCGCTC ACGCCTTACT TCGGGCTGCG CGACAGCACG
GCGGCCACGG CCTTTGCAGA GGCGCTTCCC GGCAGCGGCA GCTCACGCGG CAGCAGCTAT
CTGGACCTGA ACTACCAGCA TCCGCTGGGC GACTGGGCCG TGCTGGGCCT GCATGCCGGC
CACACGCAGG TGCGCAACTA CAGCGAACTG TCGTATGCCG ACTGGCGCGT CTCGCTGGCC
CGCAGCTGGG GCCCATGGAC GGCCACGCTG GCCTGGGCCG GCACCTCGGC CGACACGCGC
TACTACCGCG CGGCCAACGC GGCGGGCCAG ATGCAAAGCC TGGGCCGCAG CGGCTGGGTG
CTGTCGCTGT CGGCGGCGTT CTAG
 
Protein sequence
MAAAGAVPRF SLAALLSLAA ASCHAQAETS PVSAASAAAQ ESPAPAYALT GSVTLLSDYR 
FRGISQSWMG PALQGGLELS LPRGAYLGVS GSSVSRHSYL DGRALELDLY GGWRTELPAG
WTGDIGLLHY NYPGARVPRG DGGGGVRYDT TEAYLAASHG GFSAKWSLAL TPYFGLRDST
AATAFAEALP GSGSSRGSSY LDLNYQHPLG DWAVLGLHAG HTQVRNYSEL SYADWRVSLA
RSWGPWTATL AWAGTSADTR YYRAANAAGQ MQSLGRSGWV LSLSAAF