Gene Daci_5919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5919 
Symbol 
ID5751540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6584969 
End bp6586399 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content64% 
IMG OID641301051 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_001566932 
Protein GI160901350 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG CTGTTCGTCC CGTTTCCGCC GACACGGCCA TCGCTGACAT TTCCCTCGCT 
GCCTGGGGCC GCAAGGAAAT CCTGATCGCC GAAACCGAAA TGCCCGGCCT GATGGCCACG
CGCGAGGAAT TCGCCGCGGC CCAGCCCCTC AAGGGCGCGC GCATCGCGGG CTCGCTGCAC
ATGACCATCC AGACGGCCGT GCTGATCGAG ACGCTCAAGG CCCTGGGCGC CGAAGTGCGC
TGGGCGTCGT GCAACATCTT CTCGACGCAG GACCACGCTG CTGCCGCCAT CGCGGAAACC
GGCACGCCCG TGTTCGCCAT CAAGGGCGAA TCGCTGGCCG ACTACTGGGA CTACACCCAC
CGCATCTTTG AATTCGGCGC CGCCGGCACC GAAGGCGAAG GCCCCAACAT GATCCTGGAC
GACGGCGGCG ACGCCACCAT GCTGCTGCAC CTGGGCATGC GCGCCGAAAA GGACCTGTCC
GTGCTGGACA ACCCCGCCTC CGAAGAAGAG AAGATCGCCT TCGCCGCCAT CCGCGCCAAG
CTGGCCCAGG ACCCCACCTG GTACACGCGC AAGAGCGCCC ACATCATCGG CGTGACCGAA
GAGACCACGA CCGGCGTGCA CCGCCTCAAC GAGATGTCGG CCAAGGGCAC GCTGAAGTTC
CGTGCCATCA ACGTCAACGA CTCGGTCACC AAGAGCAAGT TCGACAACCT CTACGGCTGC
CGCGAATCGC TGGTGGATGG CATCAAGCGC GCCACCGACG TGATGATCGC CGGCAAGGTT
GCCGTGGTGG CCGGCTACGG CGACGTGGGC AAGGGCTGCG CCCAGGCGCT GCGCGCGCTG
TCGGCCCAGG TCTGGGTCAC CGAGATCGAT CCCATCAACG CCCTGCAGGC GGCCATGGAA
GGCTACAAGG TCGTGACCAT GGAGTGGGCA GCCGACAAGG CCGACATCTT CGTGACCACC
ACCGGCAACC GCGACATCAT CCGCCACGAG CACATGGTGG CCATGAAGAA CGAAGCCATC
GTCTGCAACA TCGGCCACTT CGACAACGAG ATCGACGTCG CCTCCATCGA GCAGTACCAG
TGGGAAGAAA TCAAGCCCCA GGTGGACCAC ATCACCTTCC CTGACGGCAA GAAGATCATC
CTGCTGGCCA AGGGCCGCCT GGTGAACCTG GGTTGCGCCA CCGGCCACCC CAGCTTCGTG
ATGAGCGCCT CGTTCGCCAA CCAGACCATC GCCCAGATCG AGCTGTTCAC CAAGCCCGAC
GCCTACGAGG TCGGCAAGGT CTACGTGCTG CCCAAGATCC TGGACGAGAA GGTCGCCCGC
CTGCACCTGA AGAAGGTCGG CGCCATGCTG ACCGAACTGA CGGACGGCCA GGCTGCCTAT
ATCGGCGTGA GCAAGCAGGG CCCCTACAAG CCCGAAACTT ATCGCTACTA A
 
Protein sequence
MNAAVRPVSA DTAIADISLA AWGRKEILIA ETEMPGLMAT REEFAAAQPL KGARIAGSLH 
MTIQTAVLIE TLKALGAEVR WASCNIFSTQ DHAAAAIAET GTPVFAIKGE SLADYWDYTH
RIFEFGAAGT EGEGPNMILD DGGDATMLLH LGMRAEKDLS VLDNPASEEE KIAFAAIRAK
LAQDPTWYTR KSAHIIGVTE ETTTGVHRLN EMSAKGTLKF RAINVNDSVT KSKFDNLYGC
RESLVDGIKR ATDVMIAGKV AVVAGYGDVG KGCAQALRAL SAQVWVTEID PINALQAAME
GYKVVTMEWA ADKADIFVTT TGNRDIIRHE HMVAMKNEAI VCNIGHFDNE IDVASIEQYQ
WEEIKPQVDH ITFPDGKKII LLAKGRLVNL GCATGHPSFV MSASFANQTI AQIELFTKPD
AYEVGKVYVL PKILDEKVAR LHLKKVGAML TELTDGQAAY IGVSKQGPYK PETYRY