Gene Daci_5917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5917 
Symbol 
ID5751538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6582759 
End bp6583586 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID641301049 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001566930 
Protein GI160901348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTC CGATCAGCTT CGAATTCTTC CCGACCAAGA CGCCCGAAGG CGCGGCCAAG 
CATGTGCAGG TGCGCAAGAA CCTCTATGCG CGCAAGCCCC AGTTCTGCTC CGTCACCTAT
GGCGCGGGCG GCTCCACGCA GGCCGGCACC TTCAACATGG TGCGTGACAT CCAGAGCGAA
GGCGTCAGCG CGGCATCGCA TTTCTCCTGC GTGGGCGCCA CGCACGACAA GGTGCGTGCC
GAGCTGCAGG AGCTCAAGGC CATGGGCGTG CGCCGCATCG TCGCGCTGCG CGGCGACCTG
CCCAGCGGCT ATGGCCTGGG AGGGGAATTC CAGTACGCCA GCGACCTCGT GGAATTCATC
CGCCGCGAGT TCGGCGACTG GTTCCACATC GAGGTGGCAG CCTATCCCGA GGTCCATCCG
CAGGCGAAAT CCCCACATTC CGATCTGGAA GCGTTTGCGG CTAAAGTGCG CGCTGGCGCG
GATTCCGCGA TCACCCAATA TTTCTACAAT GCCGACGCCT ACTGCCGTTT CGTTGATGCG
GCGCGCGGCA TGGGGCTTGA TGTACCGGTT GTTCCCGGCA TCATGCCCAT CACCAGCTCT
ACGCAGCTGA TGCGCTTCTC GGACGCCTGC GGCGCCGAGA TCCCGCGCTG GATCCGCCTG
CGTCTGCAGG CTTACGGAGA TGACACGGCG TCCATTCGCG CCTTCGGCCT CGATGTCGTG
TCCCGTCTAT GCGAGCAGTT GCGCAGCCAG GGCGCTCCCG GGCTGCACTT CTATACGATG
AACCAGAGCG TCGCCACGCT GGAAATCTGC GATCGATTGG GCCTTTGA
 
Protein sequence
MSFPISFEFF PTKTPEGAAK HVQVRKNLYA RKPQFCSVTY GAGGSTQAGT FNMVRDIQSE 
GVSAASHFSC VGATHDKVRA ELQELKAMGV RRIVALRGDL PSGYGLGGEF QYASDLVEFI
RREFGDWFHI EVAAYPEVHP QAKSPHSDLE AFAAKVRAGA DSAITQYFYN ADAYCRFVDA
ARGMGLDVPV VPGIMPITSS TQLMRFSDAC GAEIPRWIRL RLQAYGDDTA SIRAFGLDVV
SRLCEQLRSQ GAPGLHFYTM NQSVATLEIC DRLGL