Gene Daci_5903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5903 
Symbol 
ID5751524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6565093 
End bp6566523 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content71% 
IMG OID641301035 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_001566916 
Protein GI160901334 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAC CTCTGGATCT CGTCATCATG GCCGCGGGCA AGGGCACGCG CATGAAAAGC 
CGCCTTCCCA AAGTCCTGCA GCGCCTGGCG GGGCGGCCGT TGCTGGGCCA TGTGCTGTCC
ACGGCGGCGC AGCTGGATGC GCGCTCGGCC GTGGTGGTCA CGGGCCACGG CGCGGACCAG
GTGGAGACCG CCATGGCGGC GGCCTGCCAG GGCGGCTCCA TGGCGCTGAA GTTCGTGCGC
CAGGAGCCGC AGCTGGGCAC GGGCCACGCG GTGCAGCAGG CCGTGCCCGC GCTGGCGGGC
GATGGCATGG TCATCGTGCT CTCGGGCGAT GTGCCGCTGA CGCAGGCCGA CACGCTGCGC
GCCCTGGTCG ATGCGGCCGA TGGCCAGCGG CTGGCGCTGC TGACCGTGCG CCTGCCCGAT
CCCACGGGAT ATGGCCGCAT CGTGCGCGGC GAAGACGGCA CGGTGCAGCG CATCGTCGAG
CAAAAGGATG CCAATGACGC CCAGCGCGCC ATCCAGGAAA TCTACAGCGG CATCATGGCC
GTGCCGGCCC GCCACCTGGC CGGCTGGCTG GCCCGCCTGA CCAATGACAA CGCCCAGGGC
GAGTACTACC TGACCGACGT GGTCGCCATG GCCGTGGCCG ACGGCGTGCC CGTGGTCGCG
CACTGCATTG CCGACCCGGT GCAGGTGGCG GGCGTCAACA GCCCGCTGCA ACTGGCCGAG
CTGGAGCGCG CCCACCAGGG CGCCCAGGCC CGCACGCTGA TGGAGCAGGG CGTGCGCCTG
GCCGACCCCG CGCGCTTTGA CCTGCGCGAC GACCCGCGCA CTGGCCGCGC GGCACGCCTG
GCCTGCGGGC AGGATGTGGA GATCGACGTG GGCTGCATCT TCAGCGGCCA TGTGGAGATT
GGCGAAGGTG CGCGCATCGG CGCCTATTGC AGCATTGCCA ACGCCACGAT TGCGGCGGGC
GCCGTCCTCC ATCCGTACAC CCATGTCGAT GGCGAGAAGG CCGGCGTCAG CGTGGGCGAG
GGCGCCCTGG TCGGCCCGTT TGCGCGCCTG CGCCCCGGAG CGCAACTGGG CCGCGAAGTG
CACATCGGCA ACTTCGTCGA GGTCAAGAAC TCCGTGCTGG CCGATGGCGC CAAGGCCAAC
CACCTGGCCT ACCTGGGCGA TGCCACGGTG GGCGAGCGCG TCAACTACGG CGCCGGCTCC
ATCACGGCCA ACTACGACGG CGTGAACAAG CACCGCACGG TGATCGAGGC CGACGTGCAC
ATCGGCAGCA ACTGCGTGCT GGTGGCGCCC GTCACCATTG GCGCGGGCGG CACGGTGGGC
GGCGGCTCCA CGGTCACCAA GAGCACCGAG CCCGGCGTGC TCACGGTATC GCGGGGCAGG
CAGGTGAGCA TCACCAGCTG GAAGCGCCCA GTCAAACTGC CCAAGTCCTG A
 
Protein sequence
MTAPLDLVIM AAGKGTRMKS RLPKVLQRLA GRPLLGHVLS TAAQLDARSA VVVTGHGADQ 
VETAMAAACQ GGSMALKFVR QEPQLGTGHA VQQAVPALAG DGMVIVLSGD VPLTQADTLR
ALVDAADGQR LALLTVRLPD PTGYGRIVRG EDGTVQRIVE QKDANDAQRA IQEIYSGIMA
VPARHLAGWL ARLTNDNAQG EYYLTDVVAM AVADGVPVVA HCIADPVQVA GVNSPLQLAE
LERAHQGAQA RTLMEQGVRL ADPARFDLRD DPRTGRAARL ACGQDVEIDV GCIFSGHVEI
GEGARIGAYC SIANATIAAG AVLHPYTHVD GEKAGVSVGE GALVGPFARL RPGAQLGREV
HIGNFVEVKN SVLADGAKAN HLAYLGDATV GERVNYGAGS ITANYDGVNK HRTVIEADVH
IGSNCVLVAP VTIGAGGTVG GGSTVTKSTE PGVLTVSRGR QVSITSWKRP VKLPKS