Gene Daci_5899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5899 
Symbol 
ID5751520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6560162 
End bp6562081 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content69% 
IMG OID641301031 
Productglucosamine--fructose-6-phosphate aminotransferase, isomerizing 
Protein accessionYP_001566912 
Protein GI160901330 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGCA TCGTCGCAGC GGTTTCCTTC CGCGATATCG TCCCCGTTCT CGTCCAGGGC 
CTGCAGCGCC TGGAATATCG CGGCTATGAC TCCTGCGGCG TGGCCGTGCA GGCGCTGGAC
GCCCAGGGCG TGCACAGCCA GGGCCTGCAG CGCGCCCGTT CCACGGCGCG CGTGGCCGAA
CTCATGGCCC AGGTGCAGCA GGACAAGGTC ATCGGCCACA CCGGCATTGC CCATACCCGC
TGGGCCACGC ATGGCGAGCC GGCCGTGCGC AACGCCCATC CGCATTTCAG CCACGGCCCC
GGCGTCTCGC CCGTGGCCGA TGCCGACCAG CCGGCCCGCG TGGCCCTCGT GCACAACGGC
ATCATCGAAA ACTACGAAGC CCTGCGCGCC GAGCTGCAGT CCAAGGGCTA TGTCTTCGCC
AGCCAGACCG ATACCGAGGT CATCGCCCAC CTGGTGGACA GCCTCTACGG CGGTGATCTG
TTCGAGGCCG TGCAGGCCGC CACGCAGCGG CTGCATGGTG CCTTCGCCAT CGCCGTCATG
CACAAGGACG AGCCGCAGCG CGTGGTCGGC TCGCGCGCCG GCTCGCCGCT GATCCTGGGC
GTGGGCCAGG AGGGCGCCGA GCATTTCCTG GCCAGCGACG CCATGGCCCT GGCCGGCGTG
ACCGACCAGA TCGTCTACCT GGAAGAGGGC GACATCGTGG ACCTGCAGCC CGGCCGCTAC
TGGCTGGTGG GCAAGGGCGG CGAGCGCCTG GCGCCCGAGC AGCGCCCCGT GCGCACCGTG
CACGCCCACA GCGGCGCGGC CGAGCTGGGC CCCTACCGCC ACTACATGCA AAAGGAAATC
TTCGAGCAGC CGCGCGCCAT TGCCGACACG CTGGAAGGCG TGCAGGCCAT CGTGCCCGAG
CTGTTCGACG GCGCGGGCTC GGACGGCAAG TCCGGCGTCT CGGCCTGGCG CGTGTTCAAG
GAAATCGACC GCGTGCTCAT CCTGGCCTGC GGCACCAGCT ACTACAGCGG CTGCACGGCC
AAGTACTGGA TCGAAGCGCT GGCCGGCCTG CCCTGCAGCG TGGAAGTGGC CAGCGAGTAC
CGCTACCGCA CCAGCGTTCC CCATCCCAAG ACCCTGGTCG TCACCATCAG CCAGTCGGGC
GAGACCGCCG ACACCCTGGC CGCGCTGCGC CACGCGCAGA GCCTGGGCAT GAAGCACACG
CTGACCGTCT GCAACGTGGC CACCAGCGCC ATGGTGCGCG AATGCGAGCT GGCCTACATC
ACGCGCGCCG GCGTGGAGAT CGGCGTGGCA TCCACCAAGG CCTTCACCAC CCAGCTGGCG
GGCCTGTTCC TGCTGACCCT GGCCCTGGCC CAGTCGCAGG GGCGCCTGAG CGAGGAAAAG
GAGCAGCAGT ACCTTGCCGC CATGCGCCAC CTGCCCGTGG CCCTGCAATC GGTGCTGGCG
CTGGAGCCCC AGGTCATCAG CTGGTCCGAG GACTTCGCCA AGCGCGAGAA CGCGCTCTTC
CTGGGCCGTG GCATCCACTA CCCGATTGCG CTGGAAGGCG CGCTCAAGCT CAAGGAAATC
AGCTACATCC ACGCCGAGGC CTATCCGGCC GGCGAGCTCA AGCACGGCCC GCTGGCCCTG
GTGGACAGCG CCATGCCCGT GGTCACGGTC GCGCCCAACG ACGAGCTGCT GGAAAAGCTC
AAGAGCAACA TGCAGGAAGT GCGCGCGCGC GGCGGCGTGC TCTACGTGCT GGCCGATGCC
AAGACCAACA TCGAAAGCAG CGAAGGCATG CACGTCATCC GCATGCCCGA GAACTACGGC
GCCCTGAGCC CCATCCTGCA CGTGGTCCCG CTGCAGCTGC TGGCCTACCA CACGGCCTGC
GCACGCGGCA CCGACGTGGA CAAGCCGCGC AACCTGGCCA AGAGCGTGAC GGTGGAGTGA
 
Protein sequence
MCGIVAAVSF RDIVPVLVQG LQRLEYRGYD SCGVAVQALD AQGVHSQGLQ RARSTARVAE 
LMAQVQQDKV IGHTGIAHTR WATHGEPAVR NAHPHFSHGP GVSPVADADQ PARVALVHNG
IIENYEALRA ELQSKGYVFA SQTDTEVIAH LVDSLYGGDL FEAVQAATQR LHGAFAIAVM
HKDEPQRVVG SRAGSPLILG VGQEGAEHFL ASDAMALAGV TDQIVYLEEG DIVDLQPGRY
WLVGKGGERL APEQRPVRTV HAHSGAAELG PYRHYMQKEI FEQPRAIADT LEGVQAIVPE
LFDGAGSDGK SGVSAWRVFK EIDRVLILAC GTSYYSGCTA KYWIEALAGL PCSVEVASEY
RYRTSVPHPK TLVVTISQSG ETADTLAALR HAQSLGMKHT LTVCNVATSA MVRECELAYI
TRAGVEIGVA STKAFTTQLA GLFLLTLALA QSQGRLSEEK EQQYLAAMRH LPVALQSVLA
LEPQVISWSE DFAKRENALF LGRGIHYPIA LEGALKLKEI SYIHAEAYPA GELKHGPLAL
VDSAMPVVTV APNDELLEKL KSNMQEVRAR GGVLYVLADA KTNIESSEGM HVIRMPENYG
ALSPILHVVP LQLLAYHTAC ARGTDVDKPR NLAKSVTVE