| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5889 |
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| Symbol | |
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| ID | 5751510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6544930 |
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| End bp | 6547509 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641301021 |
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| Product | cell surface receptor IPT/TIG domain-containing protein |
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| Protein accession | YP_001566902 |
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| Protein GI | 160901320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.622586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAA CTAGCCACAG GCGCCCTTCC ATCCGATCTT TTCGCTGGAT GCCAAGGTCA
TGGATTATTG TTTTCATATT TTTTTCAGCA TCAACTGCTT ATGCAGCAGC GAGCAGGACA
TTGCTTTCGA CTCTCGATGT AGGTCCAGGA AATGTATGGG TGAACGCCAG TTACCCAAGA
TACCAGGAAT TCAGAACCGG TGAAACCAAT GTCGTCATCA CCGATGTATC CATTCGAATT
TTTGATTCAC TTGGCACTGG ATTTCCCTTG TTGAAGCTGT GCGGCAGCCC ATCCGAAAAC
TGCCAACAAC TCGACCACAA GGAAACCGTT GGCAATGTCT ACAGCTTCAC CGGTTCCTAT
CAAGCATCCG CCAACAAGTC TGTGCGCATC ATTTTCGATT GCAATTGCGA TGGCGGCTCA
GGATACGGAG TTTATTTCGG CCTCAGATCC ATTCCCGGAG CATCCTCCAA TGCGCCGGGC
TATCAATTTG CCGTCAAGGT AGATGCCATC GCCTTGCCGA CCATCACACG GATTCTGCCC
TCATCCGGCC CGACTACTGG AAACACGCAG GTCAGGCTCG ATGGCACAGG ACTTCTGGAC
GCTGCAGGCA TCAAATTCGG CGATACGGAC GCATTGCAAT TCCAGATGGA TAGCGACACC
CAAATCACGG CGGTTTCCCC TGCACACGCA TCAGGAACTG TGGGCATCAA GCTCGTAACC
ACGGCCAATG GTGCCTACAC CAACGGCGAC TTCACTTATG TGGCTGCTCC GGCCATCACG
GCCATCCATC CCATCGCCGG CCCCACTGCC GGAGGCACAC CGGTCATCCT GACCGGCTCG
GGGTTCACGT CAGCGGCGCC CTCCGGCGCT GTGCAGTTCG GCAGCACTGC CGCCAATTAC
ACGGTCAACA GCGACACGCA GATCACAGCC ATTGCTCCTC CTGGCGCAGC CGGCACCGTC
GAAATCACCG TGTCCACCAT CGGTGGCAAC TCCGCCAGCA GCATTGGCGA CCGGTTCACT
TATGTGGCTG CTCCGGCCAT CACGGCCATC CATCCCATCG CCGGCCCCAC TGCCGGAGGC
ACACCGGTCA TCCTGACCGG CTCGGGGTTC ACGTCAGCTG CGCCCTCCGG CGCTGTGCAG
TTCGGCAGCA CTGCCGCCAA TTACACGGTC AACAGCGACA CGCAGATCAC AGCCACTGCT
CCTCCCGGCG CAGCCGGCAC CGTCGACATC ACCGTGTCTA CCATCGGTGG CAACTCCGCC
AGCAGCATTG TCGACCGGTT CACTTATGTG GCTGCTCCGG CCATCACGGC CATCCATCCC
ATCGCCGGCC CTACTGCCGG AGGCACACCG GTCATCCTGA CCGGCTCGGG GTTCACGTCA
GCGACGCCCT CCGGCGCTGT GCAGTTTGGC AGCACTGCCG CCAATTACAC GGTCAACAGC
GACACGCAGA TCACAGCCAT TGCTCCTCCC GGCGCAGCCG GCACCGTCGA CATCACCGTG
TCCACCGTCG GTGGCACCTC GGCCACCAGC GCCGGGGACC GTTTCACCTA TGCCCAGGCA
CCGACAACTG CATCGATCAC CCCGACGACA GGACCCAGCG CGGGAGGCAC TCAGATCACC
CTGACCGGAA CCCACCTGAG CGCCGCCAGC ACGGTGAAGT TCGGCAATCA AAGCGCAACT
GGCGTTTCGG TGGTCAGCGA TACGCAGCTC ACCGCTATCT CCCCCCCAGG CACCGGGACT
GTGGACCTGA CGGTGACCAC TCCCGGTGGC ACTTCGGCGA TCACGGGCAC AGCCCGGTTC
AGCTATGCAG GCGTGCCGTC CATCACAGGC TTGTCCACGC AGCACGGGCC GGTTGCGGGT
GGCACCCAGG TGCTCATCTC CGGCAGCGGA TTCACCGCTG CAACATCCGT CAAATTCGGA
ACCGCCGAGG CTGCGGGATT CACCGTGGAC AGCGCAACCC GCATCACGGC GAACGCACCG
CCCGGTTCAT CGGGTATCGT TTCGGTTTCG GTGACGACCC CCGAGGGCAC CAGCCCTGCA
AGCGCAGTGG CACAGTTCCG CTATCAGCTC GACTCGGCCT CCCTGCTGTT TCCCGAAGGA
GAATTGGCCA TGCACCTGTC CGGCGCGGAT TGCGGCTTCG AAGGGATGCC GACAAAGAGT
GCCCCCCCAC CGACCGGCCT CCCCTCGGGC TTCGGCTTTC CCTATGGACA GATCGCCTTC
CAGGCTGGCG GCTGTACCAG CGGCGGGACG CTTCGTGTCG CGCTCACGCT GCCCAAGGAC
GTGCCCGCGG GCACCCAGCT CTACAAACTG ATCAACGGCC AATGGCTGAA ATGGGATGCG
CAGGTGAGTG GCGCAGACAT TGTTTTTTCG GTCACCGACA ATGACGGAAA CTCCACCGCC
CAGACCACCG GGGACAACGA TCCCACACCA GGCAGGATCG ACGACCCGAT CATGGTCGCG
GTGCCCCTGC TCCCTGCCAC GCCTGCCGCC GTTCCGGCTC TGGGCCACTG GTCTCTGACG
CTTCTGTCCC TGCTTTTTGC CGGCCTGCTT GCGGGAGGCT GGCGCGCTCC CAGAAGTTGA
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| Protein sequence | MTETSHRRPS IRSFRWMPRS WIIVFIFFSA STAYAAASRT LLSTLDVGPG NVWVNASYPR
YQEFRTGETN VVITDVSIRI FDSLGTGFPL LKLCGSPSEN CQQLDHKETV GNVYSFTGSY
QASANKSVRI IFDCNCDGGS GYGVYFGLRS IPGASSNAPG YQFAVKVDAI ALPTITRILP
SSGPTTGNTQ VRLDGTGLLD AAGIKFGDTD ALQFQMDSDT QITAVSPAHA SGTVGIKLVT
TANGAYTNGD FTYVAAPAIT AIHPIAGPTA GGTPVILTGS GFTSAAPSGA VQFGSTAANY
TVNSDTQITA IAPPGAAGTV EITVSTIGGN SASSIGDRFT YVAAPAITAI HPIAGPTAGG
TPVILTGSGF TSAAPSGAVQ FGSTAANYTV NSDTQITATA PPGAAGTVDI TVSTIGGNSA
SSIVDRFTYV AAPAITAIHP IAGPTAGGTP VILTGSGFTS ATPSGAVQFG STAANYTVNS
DTQITAIAPP GAAGTVDITV STVGGTSATS AGDRFTYAQA PTTASITPTT GPSAGGTQIT
LTGTHLSAAS TVKFGNQSAT GVSVVSDTQL TAISPPGTGT VDLTVTTPGG TSAITGTARF
SYAGVPSITG LSTQHGPVAG GTQVLISGSG FTAATSVKFG TAEAAGFTVD SATRITANAP
PGSSGIVSVS VTTPEGTSPA SAVAQFRYQL DSASLLFPEG ELAMHLSGAD CGFEGMPTKS
APPPTGLPSG FGFPYGQIAF QAGGCTSGGT LRVALTLPKD VPAGTQLYKL INGQWLKWDA
QVSGADIVFS VTDNDGNSTA QTTGDNDPTP GRIDDPIMVA VPLLPATPAA VPALGHWSLT
LLSLLFAGLL AGGWRAPRS
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