Gene Daci_5881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5881 
Symbol 
ID5751502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6536650 
End bp6537210 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content67% 
IMG OID641301013 
Productputative lipoprotein 
Protein accessionYP_001566894 
Protein GI160901312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.175734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACA TCACCCACTC CGCTTCGTTT TCGCCGCTGC GGCGCGTCTG CCTGGGGGCG 
GCATTGGCAC TGTCCCTGGC GGGCTGTGCC GGGCCTTCGG TCCAGGACTA CGCCAAGGAG
CAGCCGACGC TGGACCTGCG CCAGTATTTC AACGGGCCGC TGACGGCGCA CGGCATGTTC
ACGGACCGAT CGGGCAAGGT GGTCAAGCGA TTCACCGTGC GCATGACGGG CCGCTGGAAT
GGCGACGAGG GATCCCTGGA GGAGCACTTC GTCTACAGCG ACGGCAGCAC GCAGGAGCGG
GTCTGGCATA TCCGCCACCT GGGCGACGGC CGCTACAGCG GCCGGGCCGA CGACGTGGTG
GGCGAGGCCC AGGGCCAGGG CGCGGGCAAT GCCTTCCGCT GGAGCTATGT GCTGGCCCTG
CCCGTGAACG GGCGGGTCTG GAACGTCCAC ATGGATGACT GGATGTACCT CATGGACGGG
CGCACCCTGC TCAACCGCAC GGCCATGAGC AAGCTCGGCG TGCACCTGGG CGATGTGACG
CTGTCCTTTG TCAAGGAGTG A
 
Protein sequence
MSHITHSASF SPLRRVCLGA ALALSLAGCA GPSVQDYAKE QPTLDLRQYF NGPLTAHGMF 
TDRSGKVVKR FTVRMTGRWN GDEGSLEEHF VYSDGSTQER VWHIRHLGDG RYSGRADDVV
GEAQGQGAGN AFRWSYVLAL PVNGRVWNVH MDDWMYLMDG RTLLNRTAMS KLGVHLGDVT
LSFVKE