| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5878 |
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| Symbol | |
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| ID | 5751499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6534055 |
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| End bp | 6535422 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641301010 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001566891 |
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| Protein GI | 160901309 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.243171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTGC CCTCCCCCTG GACGCCCCGT CTTGCGCGCA TTGAAGCCAG TGCCGCAGAG
CGGCTGGCGC GCGCCCTGGC CGACGACATC GTCGAAGGCC GGCTGGCCGG CGGCGACCGC
CTTCCCGCCC ACAGGGACCT GGCCGACAGG CTGCAGATCG GCCTGGGCTC GGTGACCAGG
GCCTATGCGC TGCTGGAGCG CCGGGGGCTG ACACGCAGCG TCAGGGGCCG GGGCACCTTC
GTGGCGTCAC AGCAGGCGCA GGCTGGCGAG GACATCGACC TGTCTTCCAA CGCGCCGCCG
GCCGCCATCA GTGCGCGCGT CCTGGCTCGT ACGCTGACCG GGATTGCGCG CAGCATCGAT
ACCGATCATT TCAACTTCTA TGCCCCGCCC CAGGGCCACC TGGAGCATCG CCGCGTGCTC
GCGCGCTGGC TGCAGACGCT GGGCCTGAAC GTGGAACCCG ACCACATGGT GCTGACCAGC
AGCGCGCGCC AGGCTCTGTC CCTGGCCTTC GATCTGGTCT GTCGGCCCCG GGGCCGGCTG
CTGACCGAGC GCATCACCTA CCCCGGCGCC ATTGCCCTGG CCCGGCGCAA GGGCTGCGCC
CTGCAGGGCC TGGCCATCGA CGCTCAGGGC CTGCTGCCGC AGGCGCTGGC CGATGCGCTG
GAGGGCATTC CCGCCGCCGA AGGCAAGGTG GTCTACCTCA CCCCCACGCT GCACAACCCG
ACCACGGCCA CCATGGGCGC GGAGCGCAGG CAGGCGATCG TGGACATCTG CCGCAGCGCA
GGCGCCTGGA TCATCGAGGA CGGCGTGTAC GCCGCCTGCT TGCCCGATCA CGCATCCTTG
GCCCATCTGG CCACGCTGGC GCCCGAGATC ACGCTGCATG TGAACGGGCT GTCCAAGTCC
CTGGGCCCGG GGCTGCAGGT GGGCATGCTG GTGCTGCCCG CTTCGCTGGG CGGCGCGGCT
GTGGAGCTTG TGCAGGAGAT GTCCATGGCG CCTTCGGCCC TCTCCTGCGC CGTGATCGAT
GAATGGCTGT CGCACGGCGT GGTCGCTTCC CTGCAGGCCG ACCTGCGCCA TGAGGCACAG
CGGCGCTGCC GGCTGGCCGC ATCACACCTT GCCTCGCACC TGAGTGGCTC CGGCCTGGTG
CTGCACCCCG AGGCCTACAA CGCCTGGCTG CCCATGGAGC GCGAAGCCGC CGGCCGCCTG
GTATCGGCCG CAGCGGCGCT GGGCTTGAAG CTGACCGATC CGGGCTCGCT CATGGTGGAC
CCGCAGGAGC AGGCCAGCGG GCTGCGCATC TGCCTGGGTG CGCCGCGTTT CGACGCGCTG
GACGGCGCCC TGGCGCAGTT GGCCCGGCTG CTTACTGCGG TGCCCTGA
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| Protein sequence | MLLPSPWTPR LARIEASAAE RLARALADDI VEGRLAGGDR LPAHRDLADR LQIGLGSVTR
AYALLERRGL TRSVRGRGTF VASQQAQAGE DIDLSSNAPP AAISARVLAR TLTGIARSID
TDHFNFYAPP QGHLEHRRVL ARWLQTLGLN VEPDHMVLTS SARQALSLAF DLVCRPRGRL
LTERITYPGA IALARRKGCA LQGLAIDAQG LLPQALADAL EGIPAAEGKV VYLTPTLHNP
TTATMGAERR QAIVDICRSA GAWIIEDGVY AACLPDHASL AHLATLAPEI TLHVNGLSKS
LGPGLQVGML VLPASLGGAA VELVQEMSMA PSALSCAVID EWLSHGVVAS LQADLRHEAQ
RRCRLAASHL ASHLSGSGLV LHPEAYNAWL PMEREAAGRL VSAAAALGLK LTDPGSLMVD
PQEQASGLRI CLGAPRFDAL DGALAQLARL LTAVP
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