| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5862 |
|---|
| Symbol | |
|---|
| ID | 5751483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6520768 |
|---|
| End bp | 6521964 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641300994 |
|---|
| Product | methylcitrate synthase |
|---|
| Protein accession | YP_001566875 |
|---|
| Protein GI | 160901293 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCA CGATCATCGA CGCGCCATCT GCGCCATCTG CGCCAAGTGC ACCATCTGCG
TCCGCATTCA AGCCCAAGAA ATCCGTCGCG CTGTCGGGCG TGACTGCCGG CAACACGGCG
CTGTGCACCG TGGGCCGCTC GGGCAACGAC CTGCACTATC GCGGCTACGA CATCCTGGAC
ATTGCCGAGG TCTGCGAGTT CGAGGAAATC GCCCATCTGC TGGTGCACGG CAAGCTGCCC
ACGCGCCCCG AACTGCAGGC TTACAAGACC AAATTGCAGG CGCTGCGCGG CCTGCCGGCC
AGCGTCAGGC AGGCGCTGGA GCAGCTGCCT GCCGGCGCTC ATCCGATGGA TGTGATGCGC
ACCGGCGTCT CGGCCCTGGG CTGCGTGCTG CCCGAAAAGG ACGACCACAA CCTGGCGGGT
GCCCGCGACA TTGCCGACCG GCTCATGGCC AGCCTGGGCT CCATGCTGCT GTACTGGTAC
CACTGGAGCA ATTCGGGCCG GCGCATCGAG GTGGAGACCG ACGACGACTC CATCGGCGGC
CACTTCCTGC ACCTGCTGCA TGGCCACCGG CCGTCCGAAG GCTGGGTGCG CGCCATGCAC
ACCTCGCTCA ACCTCTATGC AGAGCATGAG TTCAACGCCT CCACCTTCAC GGCGCGCGTG
ATCGCGGGCA CGGGCAGCGA TATGTATTCG TCCATCGCGG GCGCCATCGG TGCGCTGCGC
GGCCCCAAGC ATGGCGGCGC CAACGAGGTG GCCTTCGAGA TCCAGAAGCG CTACGACACC
CCCGACGAGG CCGAGGCCGA CATCCGCCGC CGCGTCGATG CCAAGGAAGT GGTGATCGGC
TTCGGCCACC CGGTCTACAC CGTCAGCGAC CCGCGCAACG TGGTCATCAA GGGCGTGGCC
AAGCGCCTGT CCGACGAGGC GGGAACCACC CGCATGTACG ACATTGCCGA CCGGCTGGAA
TCGGTGATGT GGGAGGTCAA GAAGATGTTC CCCAACCTGG ACTGGTTCAG CGCCGTCAGC
TACCACATGA TGGGCGTGCC CACGGCCATG TTCACGCCGC TGTTCGTGAT CGCGCGCACC
AGCGGCTGGG CCGCGCACGT GATCGAGCAG CGCCAGGACA ACAAGATCAT CCGCCCCAGC
GCCAACTACA CGGGGCCGGA TGACCAGAAG TTCGTGCCCC TCGATGCGCG CGCCTGA
|
|---|
| Protein sequence | MSTTIIDAPS APSAPSAPSA SAFKPKKSVA LSGVTAGNTA LCTVGRSGND LHYRGYDILD
IAEVCEFEEI AHLLVHGKLP TRPELQAYKT KLQALRGLPA SVRQALEQLP AGAHPMDVMR
TGVSALGCVL PEKDDHNLAG ARDIADRLMA SLGSMLLYWY HWSNSGRRIE VETDDDSIGG
HFLHLLHGHR PSEGWVRAMH TSLNLYAEHE FNASTFTARV IAGTGSDMYS SIAGAIGALR
GPKHGGANEV AFEIQKRYDT PDEAEADIRR RVDAKEVVIG FGHPVYTVSD PRNVVIKGVA
KRLSDEAGTT RMYDIADRLE SVMWEVKKMF PNLDWFSAVS YHMMGVPTAM FTPLFVIART
SGWAAHVIEQ RQDNKIIRPS ANYTGPDDQK FVPLDARA
|
|---|
| |