| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5858 |
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| Symbol | |
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| ID | 5751479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6515099 |
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| End bp | 6516328 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641300990 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001566871 |
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| Protein GI | 160901289 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.965315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGC GTCTGAACAA GCGACGTGGC CTGCCGCTGG CGGCCCTGGT GCTGGCCGCC
CTGGCCGCCC TTGCAGCGGG CTGCGGCCGC AACGAGGCTC CGGCCGCAGC GGGTGACGCG
CTGCCCGTGG TGCAGGCCGT CACCGTGCAG CCCGCGCCGC TGGCCCTGTC CAGCGAGCTG
CCGGGCCGTA TCGAGCCCGT GCGCGTGGCC GAGGTGCGTG CGCGGGTGGC CGGCATCGTG
CTGCGCCGCC ATTTCGAGGA AGGCGCCGAC GTCCGGGCCG GCCAGGTGCT GTTCCAGATC
GACCCGGCGC CCCTGCGCGC CGCGCTGTCC CGCGCCCAGG GCCAGCTGGC CAGCGCCGAG
GCGGCCCTGC TCGATGCGCG TGCCGTGGTC GGCCGCAACG CGCCGCTGGT GGCGCAGGAG
GCGGTCAGCC GCCAGGACTT CGAGGCCATG CAGGCCCGCC TGCAGGCGGC CCAGGCCGCG
CGGCAGTCCG CCCAGGCCGA GGTGCAGGCG GCCGCCCTGA ACCTGGAATA CGCCACGGTC
AGGGCGCCTA TCGCGGGCCG CATCGGCCGT GCGCTGGTCA CCGAGGGCGC CCTGGTGGGC
CAGGGCGAGG CCACGCCCAT GGCGCTGGTC CAGCAGCTCG ACCCGGTCTA TGCCGACTTC
CAGCAGCCCG TGGCCGAAGC CCAGCGCCTG CGCGCGGCCC TGGCCGAGGG CCGCCTGGCA
CAGACGGCGG GCAAGGACGG CACGCCGGTC TCCCTGAAGG TGGACGGCAC GGGCCTGCAG
CGCACGGGGC GGCTGATGTT CTCGGATGTG ACGGTGGACC GCGGCACGGG CCAGATGGCG
CTGCGCGGGC GCTTCGACAA CCGCGACGGC ATGCTGCTGC CCGGCATGTA TGTGCGCGTG
ACCGTGGGCC AGGGCGTGGA CCCTGCCGCC ATCCTGGTGC CGCAGCGGGC CGTGCAGCGC
AGCACCGACG GGCAGGCCCA CGTGCTGGTG GTGGACGGCC AGGACACGCT GCAGATGCGC
CCCGTGCAGA CCGCGGCCAT GCATGGCGCG CAGTGGCAGA TCAGCGCAGG CCTCAAGGGC
GGCGAGCGCG TGGTGGTGGG CCGCATGGCG GGCCTGCAGC CCGGGGCGCG GGTTCAGGTC
ACGGCCCTTT CCGATGCCGC GGCCTCCCCT ACGGCGGGGC TGTCCGGCAC CTTCAGCGCC
TCCGGCAGCT CCGCCACGTC CAGCGACTGA
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| Protein sequence | MSMRLNKRRG LPLAALVLAA LAALAAGCGR NEAPAAAGDA LPVVQAVTVQ PAPLALSSEL
PGRIEPVRVA EVRARVAGIV LRRHFEEGAD VRAGQVLFQI DPAPLRAALS RAQGQLASAE
AALLDARAVV GRNAPLVAQE AVSRQDFEAM QARLQAAQAA RQSAQAEVQA AALNLEYATV
RAPIAGRIGR ALVTEGALVG QGEATPMALV QQLDPVYADF QQPVAEAQRL RAALAEGRLA
QTAGKDGTPV SLKVDGTGLQ RTGRLMFSDV TVDRGTGQMA LRGRFDNRDG MLLPGMYVRV
TVGQGVDPAA ILVPQRAVQR STDGQAHVLV VDGQDTLQMR PVQTAAMHGA QWQISAGLKG
GERVVVGRMA GLQPGARVQV TALSDAAASP TAGLSGTFSA SGSSATSSD
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