| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5856 |
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| Symbol | |
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| ID | 5751477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6510436 |
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| End bp | 6511917 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641300988 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001566869 |
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| Protein GI | 160901287 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGC ACTTCTTCCC ACGCGCCCTG TGCGCCCTGG CCGCCAGCCT GGTGCTGGCC
GGCTGCTCCC TCGCCCCGGT CCACCAGCGT CCGCAGGCGC CCATTCCCAC GCAGTGGCCG
CAACAGGATG CGGCGCCCGT GCTGTCCTCG TCGGCGGCCA CGCTGGACTG GAACAGCTTC
ATCGCCGACC GCCAGCTGCG CCAGCTGGTG GACCTGGCCC AGGCCCACAA CCGCGACCTG
CGCCAGACCC TGCTCAACGT GGAGGCGGCA CGCGCCCTGT ACCAGGTGCA GCGCGCCGAC
CGCCTGCCGG GCGTGGGCCT GCAGGGCGGC GGCACGCGCC AGCGCCTGCC GGGCGACATG
AATGCCACGG GCCAGCCGCA GGTGCAGGGC AGCTGGCAGG CCGGCTTGGG GGTGGCCGCC
TTCGAGCTGG ACCTGTTTGG CCGCGTGCGC AACCTGTCCG AAGCCGCCCT GGGCGAGTAC
CTGGCCACCG AAGAGGCCGC GCGCGCCGCC CGCATCAGCC TGGGCGCCGA AGTGGTGCAG
GCCTACCTGT CCCGCGACGG GGCCCTGCGC CGGCTGCAAC TGGCGCAGCG CACGCTGCAA
AGCCGTGAAT CCTCGCTGCG CCTGACCGCG CAGCGGCGCC AGGCGGGCAC GGCCACGGCC
CTGGACCACC AGGATGCCCT GGGCCTGGCC GCCCAGGCCC GCGCCGACGT GGAGCGCAGC
GAACGCGAGC TGCGCCAGGC CGGCAACGCC CTGCTGCTGC TGACGGGCGT GGAGGATCTG
GGGCCGTACT TGTCCGCAGA GTCGTCCCAA CCGTCCCAGC CATCCGATGT ACCCCTGCTG
CTGCAGGACC TGTCGGCCGG CACGCCTTCC GAATTGCTCA TCCACCGCCC CGACATCCAG
GCGGCCGAGC ACCGGCTGCG CGCGCGCAGC GCGGACATTG GTGCGGCGCG CGCGGCCTTC
TTCCCGCGCA TCTCGCTCAC CGGGTTCCTG GGATCGTCCA GCGCCGATCT GTCCGACCTG
TTCCGCTCGG GCCAGCGCGC CTGGTCGTTC ACTCCGCAGG TCACGCTGCC CCTCTTCGAC
GGGGGCCGCA ACCGCGCCAA CCTCGACCTG GCCGTGCTGC GCAAGGACAT GGCCGTGGCA
GCCTACGAGC AGGCCATCCA GACCGCCTTC CGCGAAGTGG CCGACGCCCT GGCCGCCACC
GACACGCTGC GCCGCGAGGA AGGCGCGCGC CTGGCGCTGC GCGACAGCAG CCGCGAAAGC
CTGCGGCTGG CGCAGGCCCG TTACCAGGCG GGGGTGGACG ACCATCTGCG CTACCTGGAC
GCACAGCGCA ACGCCTTCGC CAACGAAAGC GCCTACATCG ATACCGTGAC CCAGCGGCAG
TTGGCACTGG CCCAGCTGTT CCGCGTGCTG GGCGGCAGCT GGACTGCGCC GCCGCCGCCA
CCACCGCAGT CCCAGCCTGT GGCGGCCTTC CAGCAGCCCT GA
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| Protein sequence | MSMHFFPRAL CALAASLVLA GCSLAPVHQR PQAPIPTQWP QQDAAPVLSS SAATLDWNSF
IADRQLRQLV DLAQAHNRDL RQTLLNVEAA RALYQVQRAD RLPGVGLQGG GTRQRLPGDM
NATGQPQVQG SWQAGLGVAA FELDLFGRVR NLSEAALGEY LATEEAARAA RISLGAEVVQ
AYLSRDGALR RLQLAQRTLQ SRESSLRLTA QRRQAGTATA LDHQDALGLA AQARADVERS
ERELRQAGNA LLLLTGVEDL GPYLSAESSQ PSQPSDVPLL LQDLSAGTPS ELLIHRPDIQ
AAEHRLRARS ADIGAARAAF FPRISLTGFL GSSSADLSDL FRSGQRAWSF TPQVTLPLFD
GGRNRANLDL AVLRKDMAVA AYEQAIQTAF REVADALAAT DTLRREEGAR LALRDSSRES
LRLAQARYQA GVDDHLRYLD AQRNAFANES AYIDTVTQRQ LALAQLFRVL GGSWTAPPPP
PPQSQPVAAF QQP
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