Gene Daci_5853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5853 
Symbol 
ID5751474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6507578 
End bp6508705 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content72% 
IMG OID641300985 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001566866 
Protein GI160901284 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT ACCGCTTCTG CACCGCGCCC CTGGACAAGG CTGCGCAGGT GCGCGAACTG 
GAAGAGTTCT TCCGCGGGCA AAACCCCATC GACCTCGCTG CGGCCGACTG GCACACGCGC
ATGGAGCAAG GCCTGACCGC CGAGGAAGAA GCCGAATTCA CTGAATGGCT GGCGGCCAGC
ACGGCGCACG AGGCCGCCTT GCGCCACCTG GGCCAGAGCC TGGCGGCAGC GCGGTCCATT
CCCCCCGAAC AGGTGGCGCG CCTGCGCGCG GAGCAGGCAC GCCGGCGCTC GCAGTCGGCG
CCTCACGCAC GCCCGGAACC GGCCCCGCAG CGCCCGTCCT CCGAAGAGCG CCAAGGCTGG
AGCTGGTCCC GCCTGCTGCA GCGCCCTGCC CTGGCGGCCC TGTGCTGCAC GGTGGCCTTG
GCCTTGGCCG TGGGCGTGGG CTGGCACCAG TGGCAGCAGC AGCCCACCTT CACCAGCAGC
CACCTGACCC CACGCGGCCA GGCCAGGACC ATCACCTTGC CGGATGGCAC CGCACTGTCC
CTGGATGCCG ATACCCAGGC GCAGGTAACT CTGTACCGCG ACCGGCGCGA GGTGCGCATC
ACGCAAGGGC AGATCCTGTT TGCCGTGGCG CCCGACAGCG ACAGGCCCTT TCATGTGCTG
GCCGGCCCGG CGCGCGTCAC CGTGGGCGGC ACGCGGTTTT CCGTGCGCTA TCGCGCCACG
GGCATGGAGG CGGGCAGCGC CCAGGTGGCC GTGCAGGAAG GCCATGTGCG CGTGGCCGGT
GCGCAAGGCG CGGCAACGCC TGCCGACCTG GTCGCGGGCC AGGCCCTGAG CGTGTCGCCT
GCAGGCGTGC TCGGTCCGGT GGCGGCTGTG GCGCCCGGCA GCATTGCGCT GTGGCGCAAG
GGACTGATCC GCTTCGAGAA CACGCCCCTG GCCGACGCCC TGGCCGAGCT GGAGCGCTAC
GGGCCGACCG GCCTGGTGGT GCACGACCCG GCCGTGGCGG CCCTGCGCAT TGGCGGCACC
TACCAGACCA GCCGCCCCGC CGAGTTCGCA CGCATGCTGG TCCAGATCCT GCCCGTCACT
CTGGTGGCCG GGCCCGATGG CCAGACCGAG ATTGCCGCTG CGCCCTGA
 
Protein sequence
MRRYRFCTAP LDKAAQVREL EEFFRGQNPI DLAAADWHTR MEQGLTAEEE AEFTEWLAAS 
TAHEAALRHL GQSLAAARSI PPEQVARLRA EQARRRSQSA PHARPEPAPQ RPSSEERQGW
SWSRLLQRPA LAALCCTVAL ALAVGVGWHQ WQQQPTFTSS HLTPRGQART ITLPDGTALS
LDADTQAQVT LYRDRREVRI TQGQILFAVA PDSDRPFHVL AGPARVTVGG TRFSVRYRAT
GMEAGSAQVA VQEGHVRVAG AQGAATPADL VAGQALSVSP AGVLGPVAAV APGSIALWRK
GLIRFENTPL ADALAELERY GPTGLVVHDP AVAALRIGGT YQTSRPAEFA RMLVQILPVT
LVAGPDGQTE IAAAP