Gene Daci_5844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5844 
Symbol 
ID5751465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6498790 
End bp6499668 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content73% 
IMG OID641300976 
Productprecorrin-4 C11-methyltransferase 
Protein accessionYP_001566857 
Protein GI160901275 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.903403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC ATTTCATCGG CGCCGGCCCC GGCGCCGCCG ACCTGATCAC CGTGCGCGGG 
CGCGACCTCA TGGCGGCCTG TCCGGTCTGC CTGTACGCAG GCTCGCTGAT ACCGCGCGAG
CTGCTGGCGC ACTGCCCGCC GGGCGCGCGC ATCGTCAACA CCGCCTCCAT GAGCCTGGAC
GACATCGTGG CCGAGATCCA GGCCGCCGAG GCGCGTGGCG AAGACGTGGC GCGCCTGCAC
TCGGGCGACC TGTCCGTCTG GTCGGCCATG GGCGAGCAGC TGCGCCGCCT GCGCGAGGCC
GGCATTGCCT ACACCGTCAC GCCCGGCGTG CCCTCGTTCG CGGCCGCCGC CGCCACGCTG
GGCGCGGAGC TGACCCTGCC CGGCCTGTGC CAGTCCGTGG TGCTGACGCG CACCTCGGGC
CGCGCCACGG CCATGCCCGA GGGCGAGAAC CTGGCCGCCT TCGCGGCCAC GGGCGCCGTG
CTGGCCATCC ATCTGTCCAT CCATGTGGCC GCCAAGGTGC AGTCCGAGCT GCTGCCGCAC
TACGGCGCCG ACTGCCCCGT GGCCATCGTC TGGCGCGCCA GCTGGCCTGA CGAAACCGTG
GTGCGCACCA CGGTGGGCGG CCTGACCGAG GCCGTGGCCA CCCACATGGA GCGCACGGCC
CTGATCCTGG TGGGCCGCAG CCTGCAGGCC GAGGACTTCG GCGAAAGCCG CCTCTACGCG
GCCGACTACG ACCGCCGCTA CCGCCCGCTG GGCACCGAGC CGCGCTTTCC CGCCACCGAT
GTGCATGCGA ATGCCGCGCT GGATACCGCG AGGGATACCT TGAGGGACAC CGTGAGCGAC
ACCGTGATCG ACGTGCCCCC CGGGAGCCCC GCCCCATGA
 
Protein sequence
MTVHFIGAGP GAADLITVRG RDLMAACPVC LYAGSLIPRE LLAHCPPGAR IVNTASMSLD 
DIVAEIQAAE ARGEDVARLH SGDLSVWSAM GEQLRRLREA GIAYTVTPGV PSFAAAAATL
GAELTLPGLC QSVVLTRTSG RATAMPEGEN LAAFAATGAV LAIHLSIHVA AKVQSELLPH
YGADCPVAIV WRASWPDETV VRTTVGGLTE AVATHMERTA LILVGRSLQA EDFGESRLYA
ADYDRRYRPL GTEPRFPATD VHANAALDTA RDTLRDTVSD TVIDVPPGSP AP