| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5839 |
|---|
| Symbol | |
|---|
| ID | 5751460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6495090 |
|---|
| End bp | 6496007 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641300971 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001566852 |
|---|
| Protein GI | 160901270 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.482004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGCG CTAGGCTTGC GGCCATGGCA AGACGCAACC TCAATGACCT GCTGGCCTTC
GTCACCGTGG CGCGCGAGGG CAGCTTCACG CGCGCGGCGG CTGCGCTGGG CGTCACCCAG
TCGGCGCTGA GCCAGACCGT GCGCGCGCTG GAGGAGCGCC TGCAGATCCG CCTGCTCACG
CGCACCACGC GCAGCGTCTC GCCCACGGCG GCGGGCGAGC GGCTGATGCA GGCCATAGGC
CACCGCTTCG ACGAGATCGA GGCCGAACTC GACGCCCTGA CCGCGCTGCG CGACAAGCCC
GGCGGCACGG TGCGCATCAC CTGCGGCGAC TACATGCTGC AAAGCACCCT GCTGCCCCGG
CTGGCGCCGC TGCTGCTCGC CTATCCGGAC ATCTGCATGG AGTTCGACGT GTACTACGGA
TTCCGCGACA TCGTGGCCGA GCGCTTCGAC GCCGGCGTGC GCCTGGGCAG CACCATCGAC
AAGGACATGA TCGCCGTGCC CATCGGCCCG CCGCTGCGCA TGGCCGTGGT GTCCTCGCCC
GGGTATTTCG CGGAGCACGG CATTCCGAAG AATCCGCAGG ACCTGATGGC GCACCGCTGC
ATCAACCAGC GCATGGTGAC CTCGGGCGGC CTGTATGTGT GGGAGTTCGA GCGCCGGGGC
CGCAAGATGA ATGTGCGCGT GGACGGGCCG CTGATCTTCA ACACCACCCA GCCCCAGATC
GATGCGTACC TGGCCGGGCT GGGCATCACG CTGCTGCCCG AGGACGAGGT CATGCCCTGG
ATCCAGAGTG GCCAGCTGCA GCGCGTGTTG GAGGACTGGT GCCCAAGATT CGACGGCCAC
CACCTGTACT ACCCCAGCCG CAGGCAGCCC TCGCCCGCGT TCTCGCTGGT GGTCGATGCG
CTGCGCTGGC GCGGCTGA
|
|---|
| Protein sequence | MDGARLAAMA RRNLNDLLAF VTVAREGSFT RAAAALGVTQ SALSQTVRAL EERLQIRLLT
RTTRSVSPTA AGERLMQAIG HRFDEIEAEL DALTALRDKP GGTVRITCGD YMLQSTLLPR
LAPLLLAYPD ICMEFDVYYG FRDIVAERFD AGVRLGSTID KDMIAVPIGP PLRMAVVSSP
GYFAEHGIPK NPQDLMAHRC INQRMVTSGG LYVWEFERRG RKMNVRVDGP LIFNTTQPQI
DAYLAGLGIT LLPEDEVMPW IQSGQLQRVL EDWCPRFDGH HLYYPSRRQP SPAFSLVVDA
LRWRG
|
|---|
| |