| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5831 |
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| Symbol | |
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| ID | 5751452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6487788 |
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| End bp | 6489560 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300963 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001566844 |
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| Protein GI | 160901262 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC CCAAGACGCC CTCCCCGGCC CACGACATCA CTCCCGCCGA CGCCGAAAGC
GGCATATCGA AGGGCCTGAC CAACTACGGC GACCGCGGCT TTTCGCTGTT CCTGCGCAAG
GCCTTCATCA AGGGCGCGGG CTATACGGAC TCGGCGCTGC AGCGCCCCGT CATCGGCATT
GCCAACACGG GCAGCAGCTA CAACCCCTGC CACGGCAACG CGCCCCAGCT GATCGAGGCC
GTCAAGCGCG GCGTCATGCT GGCGGGCGGC CTGCCCATGG ACTTCCCCAC CATCTCGGTG
CACGAAAGCT TCTCGGCGCC GACCAGCATG TACCTGCGCA ACCTCATGTC CATGGACACC
GAGGAGATGA TCCGCGCCCA GCCCATGGAT GCCGTCGTGC TCATCGGCGG CTGCGACAAG
ACGGTGCCGG CCCAGTTGAT GGGCGCGGCC TCGGCCGGCA TCCCGGCCAT CCAGCTGATC
ACCGGGTCGA TGCTCACCGG CTCGCACCGC AGCGAGCGCG TGGGCGCCTG CACGGACTGC
CGCCGCTACT GGGGCAAGTT CCGCGCCGAG GAGATCGACG CCGAAGAGAT CGCCGACGTG
AACAACCAGC TGGTGGCCAG CGTGGGCACC TGCTCGGTCA TGGGCACGGC CAGCACCATG
GCCTGCATTG CCGAGGCGCT GGGCATGACG GTGCCGGGCG GCGCCTCGCC CCCCGCCGTC
ACGGCCGACC GCATCCGCAT CGCCGAACAG ACAGGCACCG AGGCCGTGCG CATGGCGCGC
GAGCGCCTGA CCATCGACAA AATCCTCACG CCCGCTGCCT TCGAGAACGC CATGCGCGTG
CTGCTGGCCA TCGGCGGCTC CACCAACGGC ATCGTGCACC TGGCCGCCAT TGCGGGGCGC
ATGGGCTATG ACATCGACCT CAAGGCCCTG GACCGCATGG GCCGCGACAC GCCCGTGCTG
CTGGACCTCA AGCCCTCGGG CGACCACTAC ATGGAGGACT TCCACCACGC GGGCGGCATG
GCCACGCTGC TGCGCGAGCT CAAGCCCCTG CTGAACCTGG ACGCCCTCAC CGTCACCGGC
CGCACGCTGG GCGAAGAGAT CGACCGCGCC GGCCCCGGCT TTGCGCAGGA CGTGGTGCGC
CCGCGCTCCA ACCCCATCTA CCCGCAGGGC GGCATCGCCG TGCTGCAGGG CAACCTGGCG
CCGGGCGGCG CCATCATCAA GCAGTCGGCC GCCCATCCCC GGCTCATGGA GCATGAAGGC
CGCGCCGTGG TCTTCGAGAA CGCGGCCGAC CTGGCCCACC GCATCGACAG CGACGATCTG
GACGTGACGG CCGACGACAT CCTCGTGCTC AAGAACATCG GCCCCAAGGG TGCGCCCGGC
ATGCCCGAGG CCGGCTACAT CCCCATCCCG CGCAAGCTGG CGCGGGCCGG AGTCAAGGAC
ATCGTGCGCA TCTCCGACGG GCGCATGAGC GGCACGGCCT TCGGCACCAT CGTGCTGCAC
GTCACACCGG AGTCGGCCGT GGGCGGGCCG CTGGCCCATG TGCACAACGG CGACCGCATC
ACGCTGTCGG TGGCGCGGCG CGAGCTGACG CTGCAGGTCA GCGACGAGGA ACTGGCCCGC
CGCGCCCGGC TCCACCCCGT GACCGAGCCC ACGGCTGAGC GCGGCTACCG CAAGCTCTTT
CTCACCACCG TGAACCAGGC CGACCAGGGC GTGGACTTCG ACTTCCTGCG CTGCGCCACC
GAACGCGGCA CCATTCCCGG CCCGCGCGAA TAG
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| Protein sequence | MTDPKTPSPA HDITPADAES GISKGLTNYG DRGFSLFLRK AFIKGAGYTD SALQRPVIGI
ANTGSSYNPC HGNAPQLIEA VKRGVMLAGG LPMDFPTISV HESFSAPTSM YLRNLMSMDT
EEMIRAQPMD AVVLIGGCDK TVPAQLMGAA SAGIPAIQLI TGSMLTGSHR SERVGACTDC
RRYWGKFRAE EIDAEEIADV NNQLVASVGT CSVMGTASTM ACIAEALGMT VPGGASPPAV
TADRIRIAEQ TGTEAVRMAR ERLTIDKILT PAAFENAMRV LLAIGGSTNG IVHLAAIAGR
MGYDIDLKAL DRMGRDTPVL LDLKPSGDHY MEDFHHAGGM ATLLRELKPL LNLDALTVTG
RTLGEEIDRA GPGFAQDVVR PRSNPIYPQG GIAVLQGNLA PGGAIIKQSA AHPRLMEHEG
RAVVFENAAD LAHRIDSDDL DVTADDILVL KNIGPKGAPG MPEAGYIPIP RKLARAGVKD
IVRISDGRMS GTAFGTIVLH VTPESAVGGP LAHVHNGDRI TLSVARRELT LQVSDEELAR
RARLHPVTEP TAERGYRKLF LTTVNQADQG VDFDFLRCAT ERGTIPGPRE
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