| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5826 |
|---|
| Symbol | |
|---|
| ID | 5751447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6482523 |
|---|
| End bp | 6483164 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641300958 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_001566839 |
|---|
| Protein GI | 160901257 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.835369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.917792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGG GGGGCGCGGC CGATCATGAA GGCATTCCTT CATTCCTGCA AAACACCATG
GCACGCCTGA CCCTGCACAC CCCGCAAACC GCCCCTGAAG CCAGCCGCCC CTTCGTGGAG
CGCGCCCTGG CCGGCAACGG ATTCCTGCCC AACCTGATCG CCATCCTGGC CAACTCGCCC
CAGGCGCTGG AGACCTATGT GACCGTGGGC CAGATCAACG CGCGCGCCCA GCTCACGCTG
GCCGAGCGCG AGGTGGTGCA GATCACGGCG GCGCGCATCC ATGGCTGCGA CTTCTGCGTG
GCCGGCCACA CCAAGCTGGC CTTCAAGCAG GCCGGCCTGA CCCAGGCCGA GGTGGTGGCG
CTGCAGGACG GCCGCGACAC GGGCCAGCCG CGCCTGGACG CCGTGCGCCG CTTTGCCGAA
GCCGTGATCG CCACGCGCGG CGCCGTCGCC GACGAGGCCC TGGCCGCCTT CCATGCAGCA
GGCCTGAGCG AGCAGCAGGC ACTGGAGGTG GTGCTGGGCA TCAGCCTGGC CACGCTGTGC
AACTTTGCCA ACAGCCTGGC GCAAAGCCCC GTCAACCCGC AGCTGCAGCC CTATCTGCCC
GAACAGTTCC GACAACCGCA GGAGAACGCA CATGCTGGCT GA
|
|---|
| Protein sequence | MARGGAADHE GIPSFLQNTM ARLTLHTPQT APEASRPFVE RALAGNGFLP NLIAILANSP
QALETYVTVG QINARAQLTL AEREVVQITA ARIHGCDFCV AGHTKLAFKQ AGLTQAEVVA
LQDGRDTGQP RLDAVRRFAE AVIATRGAVA DEALAAFHAA GLSEQQALEV VLGISLATLC
NFANSLAQSP VNPQLQPYLP EQFRQPQENA HAG
|
|---|
| |