| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5824 |
|---|
| Symbol | |
|---|
| ID | 5751445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6480624 |
|---|
| End bp | 6481439 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641300956 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001566837 |
|---|
| Protein GI | 160901255 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.971522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.461602 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA CGGAAGCTTT CTCCCCTGAC GCTCCCGCGC CCGTGCTGCA GGCACGCGGC
GCGGGCTTTG GCTATGCGCC CGGCAAGGCC GTGTTCGAGG ACATCTCCCT GAGCATTGCC
CCGCGCGAGA TCGTCTGCCT GCTCGGCGGC AGCGGCTGCG GCAAGTCCTC GCTGCTGCGC
GTGCTCGGCG GCCTGGAGTC GCCGGACGGC GGCGCCTGGA GCCGGGGCGA GCTCCAGTTC
CTCGGCCAGC CGCTGACCGC GCCGCACCCG CGCGCGGGCT TCGTGTTCCA GCAGCCCAGC
CTGCTGCCCT GGCTGGACGC GCGGCGCAAC GTGGGCTTCG GCCTGGACTT CGAGCGCCAG
CCGAAGCTGG AGGCCGAGGC CCGCAGCCAG CGCGTGGAGC AGGCGCTGCA GGCCGTGGGC
CTGGGCGGCA GCGGCGCGCT CTACCCCTCG CAGCTGTCGG GCGGCATGGC CCAGCGCGTG
GCCCTGGCGC GCGCCCTGGC CCGCGAGCCG CAGCTGCTGC TGGCCGACGA GCCGTTCTCG
GCCCTGGACG CCATCACGCG CGCCGAGATG CAGGAGCTGA TGGTGGACGT GGTCCACCGC
TGGCACACGG CCGCGCTGCT GGTCACGCAT GACATCGACG AGGCCATCCT CGTGGGCGAC
CGCATCCTGC TGATGGGCGG GCGGCCCGGC CACATCGTGC GCGAATGGCG CGTGGACATA
GCGCGCCCGC GCGAGGACGA GGCCGCCGCC GTGACCGCGC TGCGGCTGGA CATCCTCTCG
GCCCTGCACG GCGTGCGCCA TGCGGCCCAG GCCTGA
|
|---|
| Protein sequence | MTQTEAFSPD APAPVLQARG AGFGYAPGKA VFEDISLSIA PREIVCLLGG SGCGKSSLLR
VLGGLESPDG GAWSRGELQF LGQPLTAPHP RAGFVFQQPS LLPWLDARRN VGFGLDFERQ
PKLEAEARSQ RVEQALQAVG LGGSGALYPS QLSGGMAQRV ALARALAREP QLLLADEPFS
ALDAITRAEM QELMVDVVHR WHTAALLVTH DIDEAILVGD RILLMGGRPG HIVREWRVDI
ARPREDEAAA VTALRLDILS ALHGVRHAAQ A
|
|---|
| |